RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 K7ERQ8 282 aa12.95□□□□□ -0.34
GABPB1-201ENST00000220429 KDM4BO94953 1096 aa12.95□□□□□ -0.34
GABPB1-201ENST00000220429 CHRM5P08912 532 aaPredicted RBP12.95□□□□□ -0.34
GABPB1-201ENST00000220429 NCF1P14598 390 aaPredicted RBP12.95□□□□□ -0.34
GABPB1-201ENST00000220429 AGTR2P50052 363 aa12.95□□□□□ -0.34
GABPB1-201ENST00000220429 MLIPQ5VWP3 458 aa12.95□□□□□ -0.34
GABPB1-201ENST00000220429 Q6ZNB5 142 aa12.95□□□□□ -0.34
GABPB1-201ENST00000220429 CEP68Q76N32 757 aa12.95□□□□□ -0.34
GABPB1-201ENST00000220429 DMRTC2Q8IXT2 367 aaPredicted RBP12.95□□□□□ -0.34
GABPB1-201ENST00000220429 EIF4E3Q8N5X7 224 aaKnown RBP12.95□□□□□ -0.34
GABPB1-201ENST00000220429 TMEM145Q8NBT3 493 aa12.95□□□□□ -0.34
GABPB1-201ENST00000220429 HJURPQ8NCD3 748 aaPredicted RBP12.95□□□□□ -0.34
GABPB1-201ENST00000220429 OR2T12Q8NG77 320 aa12.95□□□□□ -0.34
GABPB1-201ENST00000220429 CD200R1Q8TD46 325 aa12.95□□□□□ -0.34
GABPB1-201ENST00000220429 CREB3L4Q8TEY5 395 aa12.95□□□□□ -0.34
GABPB1-201ENST00000220429 ZNF689Q96CS4 500 aaPredicted RBP12.95□□□□□ -0.34
GABPB1-201ENST00000220429 MSLNLQ96KJ4 702 aa12.95□□□□□ -0.34
GABPB1-201ENST00000220429 PPP3R2Q96LZ3 170 aa12.95□□□□□ -0.34
GABPB1-201ENST00000220429 PITX2Q99697 317 aa12.95□□□□□ -0.34
GABPB1-201ENST00000220429 IL17CQ9P0M4 197 aa12.95□□□□□ -0.34
GABPB1-201ENST00000220429 MYOFQ9NZM1 2061 aa12.95□□□□□ -0.34
GABPB1-201ENST00000220429 SLC22A3O75751 556 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 LATS1O95835 1130 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 CXCL3P19876 107 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 RORAP35398 523 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 EPHB3P54753 998 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 UFM1P61960 85 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 RNF4P78317 190 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 SSX1Q16384 188 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 BCL2L15Q5TBC7 163 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 DDI2Q5TDH0 399 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 ANKS6Q68DC2 871 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 RBMS3Q6XE24 437 aaKnown RBP12.94□□□□□ -0.34
GABPB1-201ENST00000220429 DDX53Q86TM3 631 aaKnown RBP12.94□□□□□ -0.34
GABPB1-201ENST00000220429 TCEAL8Q8IYN2 117 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 ADGRF3Q8IZF5 1079 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 DNAJC5GQ8N7S2 189 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 TTC16Q8NEE8 873 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 WDR20Q8TBZ3 569 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 C2CD4CQ8TF44 421 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 EEF1AKMT1Q8WVE0 214 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 MRPS24Q96EL2 167 aaKnown RBP12.94□□□□□ -0.34
GABPB1-201ENST00000220429 NARS2Q96I59 477 aaKnown RBP12.94□□□□□ -0.34
GABPB1-201ENST00000220429 SFXN2Q96NB2 322 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 RNF208Q9H0X6 261 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 POLG2Q9UHN1 485 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 GPR160Q9UJ42 338 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 KIAA1671Q9BY89 1806 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 GPR37O15354 613 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 KLK8O60259 260 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 CYP17A1P05093 508 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 ALPIP09923 528 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 RHCEP18577 417 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 PRDX3P30048 256 aaKnown RBP12.94□□□□□ -0.34
GABPB1-201ENST00000220429 TRHRP34981 398 aaPredicted RBP12.94□□□□□ -0.34
GABPB1-201ENST00000220429 INPP1P49441 399 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
GABPB1-201ENST00000220429 AGFG1P52594 562 aaKnown RBP12.94□□□□□ -0.34
GABPB1-201ENST00000220429 ACY1Q03154 408 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 ST3GAL4Q11206 333 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 STX4Q12846 297 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 CHRNA6Q15825 494 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 OR4F6Q8NGB9 312 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 OR6K2Q8NGY2 324 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 WDR77Q9BQA1 342 aaPredicted RBP12.94□□□□□ -0.34
GABPB1-201ENST00000220429 TM6SF2Q9BZW4 377 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 MAGIXQ9H6Y5 334 aa12.94□□□□□ -0.34
GABPB1-201ENST00000220429 THUMPD1Q9NXG2 353 aaKnown RBP12.94□□□□□ -0.34
GABPB1-201ENST00000220429 POM121CA8CG34 1229 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 IQCF5A8MTL0 148 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 ISM1B1AKI9 464 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 SULT1C2O00338 296 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 PRKRAO75569 313 aaKnown RBP12.93□□□□□ -0.34
GABPB1-201ENST00000220429 RGS11O94810 467 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 CXCL14O95715 111 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 URODP06132 367 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 LINC00032P0C843 101 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 SPP1P10451 314 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 PCP4P48539 62 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 DEFB103AP81534 67 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 PRKG2Q13237 762 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 OPCMLQ14982 345 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 MICBQ29980 383 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 FAM217AQ8IXS0 508 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 APCDD1Q8J025 514 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 COQ8AQ8NI60 647 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 GLYATL2Q8WU03 294 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 ADAMTS14Q8WXS8 1223 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 KCNJ9Q92806 393 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 LINGO1Q96FE5 620 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 PRR14Q9BWN1 585 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 C1QTNF3Q9BXJ4 246 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 CPEB1Q9BZB8 566 aaKnown RBP12.93□□□□□ -0.34
GABPB1-201ENST00000220429 BTNL2Q9UIR0 455 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 ZNF225Q9UK10 706 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 LOC390937A0A1W2PQ73 354 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 TERTO14746 1132 aaKnown RBP12.93□□□□□ -0.34
GABPB1-201ENST00000220429 SIGLEC5O15389 551 aa12.93□□□□□ -0.34
GABPB1-201ENST00000220429 SMAD6O43541 496 aaKnown RBP12.93□□□□□ -0.34
GABPB1-201ENST00000220429 VIPP01282 170 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 315.4 ms