RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 ZCCHC18P0CG32 403 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 S1PR1P21453 382 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 OTX2P32243 289 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 GPC1P35052 558 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 SOX18P35713 384 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 EIF2S3P41091 472 aaKnown RBP11.5□□□□□ -0.57
LINC00339-213ENST00000642137 HBA1P69905 142 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 GABPB1Q06547 395 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-213ENST00000642137 PCOLCEQ15113 449 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 MMEL1Q495T6 779 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 PAGE3Q5JUK9 113 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 C6orf163Q5TEZ5 329 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 KIRREL2Q6UWL6 708 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 C6orf89Q6UWU4 347 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 DGAT2L6Q6ZPD8 337 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 NDUFAF7Q7L592 441 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 PPP1R32Q7Z5V6 425 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 VASH2Q86V25 355 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 ANKRD46Q86W74 232 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 SNX32Q86XE0 403 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 GALNT12Q8IXK2 581 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 CLECL1Q8IZS7 167 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 DPP10Q8N608 796 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 NFAM1Q8NET5 270 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-213ENST00000642137 OR4A15Q8NGL6 344 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 OR9A2Q8NGT5 310 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 ELP4Q96EB1 424 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 NAF1Q96HR8 494 aaKnown RBP11.5□□□□□ -0.57
LINC00339-213ENST00000642137 NSL1Q96IY1 281 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 ART5Q96L15 291 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 PHF12Q96QT6 1004 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 PANX1Q96RD7 426 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 CCNL2Q96S94 520 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-213ENST00000642137 WDR77Q9BQA1 342 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-213ENST00000642137 EFCAB1Q9HAE3 211 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 NEUROD4Q9HD90 331 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 SERHLQ9NQF3 203 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 SIRT3Q9NTG7 399 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-213ENST00000642137 MAT2BQ9NZL9 334 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 NTMQ9P121 344 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 PTGFRNQ9P2B2 879 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 MAP10Q9P2G4 905 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 TAGLN3Q9UI15 199 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 PPIEQ9UNP9 301 aaKnown RBP11.5□□□□□ -0.57
LINC00339-213ENST00000642137 ERVK-11Q9UQG0 969 aa11.5□□□□□ -0.57
LINC00339-213ENST00000642137 IGHV1-45A0A0A0MS14 117 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 IGHV3-20A0A0C4DH32 117 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 SAGE2PA6NJ88 616 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 ZNF891A8MT65 544 aaPredicted RBP11.49□□□□□ -0.57
LINC00339-213ENST00000642137 PEX12O00623 359 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 FBP2O00757 339 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 RFXANKO14593 260 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 RRP8O43159 456 aaKnown RBP11.49□□□□□ -0.57
LINC00339-213ENST00000642137 EMC8O43402 210 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 KCNH1O95259 989 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 CT62P0C5K7 136 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 COX6A1P12074 109 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 ICAM2P13598 275 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 EFNA1P20827 205 aaPredicted RBP11.49□□□□□ -0.57
LINC00339-213ENST00000642137 UQCRC2P22695 453 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 GPR143P51810 404 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 FUT7Q11130 342 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 HSPB3Q12988 150 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 IL10RAQ13651 578 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 ZNF267Q14586 743 aaPredicted RBP11.49□□□□□ -0.57
LINC00339-213ENST00000642137 TRMT12Q53H54 448 aaKnown RBP11.49□□□□□ -0.57
LINC00339-213ENST00000642137 LRIF1Q5T3J3 769 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 PAPD4Q6PIY7 484 aaKnown RBP11.49□□□□□ -0.57
LINC00339-213ENST00000642137 SLC2A7Q6PXP3 512 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 FAM111BQ6SJ93 734 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 TMEM64Q6YI46 380 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 TRIML2Q8N7C3 387 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 POU5F2Q8N7G0 328 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 PCYOX1LQ8NBM8 494 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 ADCY4Q8NFM4 1077 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 OR7G1Q8NGA0 311 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 OR11G2Q8NGC1 345 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 MOAP1Q96BY2 351 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 C8orf44Q96CB5 159 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 SENP5Q96HI0 755 aaPredicted RBP11.49□□□□□ -0.57
LINC00339-213ENST00000642137 IMMP1LQ96LU5 166 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 TRIM4Q9C037 500 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 PAIP1Q9H074 479 aaKnown RBP11.49□□□□□ -0.57
LINC00339-213ENST00000642137 C3orf14Q9HBI5 128 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 ARL8BQ9NVJ2 186 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 WDR70Q9NW82 654 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 C19orf53Q9UNZ5 99 aaPredicted RBP11.49□□□□□ -0.57
LINC00339-213ENST00000642137 DCHS1Q96JQ0 3298 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 SPTBN2O15020 2390 aa11.49□□□□□ -0.57
LINC00339-213ENST00000642137 A0A096LPI6 279 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 NSG1A0A0A6YYJ2 146 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 MRASO14807 208 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 EFSO43281 561 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 ANP32DO95626 131 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 DDAH2O95865 285 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 HPP00738 406 aa11.48□□□□□ -0.57
LINC00339-213ENST00000642137 ABCB1P08183 1280 aaPredicted RBP11.48□□□□□ -0.57
LINC00339-213ENST00000642137 CCT3P49368 545 aaKnown RBP11.48□□□□□ -0.57
LINC00339-213ENST00000642137 CDK9P50750 372 aaKnown RBP11.48□□□□□ -0.57
LINC00339-213ENST00000642137 MNAT1P51948 309 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms