RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SPPL2CQ8IUH8 684 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 ZNF295-AS1Q8N0V1 137 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 KRT78Q8N1N4 520 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 TEX9Q8N6V9 391 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 CCNYL1Q8N7R7 359 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 ZFP62Q8NB50 900 aaPredicted RBP7.27□□□□□ -1.25
PNKP-229ENST00000637897 TTLQ8NG68 377 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 OR52B6Q8NGF0 335 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 C16orf52Q8NHV5 167 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 STAG3L4Q8TBR4 150 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 WDR20Q8TBZ3 569 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 FAR2Q96K12 515 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 CDK15Q96Q40 435 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 EFCAB11Q9BUY7 163 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 ALOXE3Q9BYJ1 711 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 DEFB126Q9BYW3 111 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 NMUR2Q9GZQ4 415 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 SEMA4BQ9NPR2 832 aaPredicted RBP7.27□□□□□ -1.25
PNKP-229ENST00000637897 DMRT3Q9NQL9 472 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 MRGBPQ9NV56 204 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 PNPOQ9NVS9 261 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 TEKT2Q9UIF3 430 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 TRIM33Q9UPN9 1127 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 RNF11Q9Y3C5 154 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 ATG4BQ9Y4P1 393 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 ASB4Q9Y574 426 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 LIPGQ9Y5X9 500 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 NINQ8N4C6 2090 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 FREM3P0C091 2139 aa7.27□□□□□ -1.25
PNKP-229ENST00000637897 OTOGQ6ZRI0 2925 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 A0A0A6YYD5 115 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 A0A1W2PR48 441 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 URADA6NGE7 173 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 ANKDD1BA6NHY2 528 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 TRPC5OSA6NMA1 111 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 SYCE1LA8MT33 242 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 A8MT66 165 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 CAPN14A8MX76 684 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 SUPT3HB4E1H0 165 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 G3V3Y1 287 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 WWP2O00308 870 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 ZNF195O14628 629 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 CLGNO14967 610 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 SLC22A2O15244 555 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 HS6ST1O60243 411 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 DIAPH2O60879 1101 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 SUPT3HO75486 399 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 GLSO94925 669 aaPredicted RBP7.26□□□□□ -1.25
PNKP-229ENST00000637897 CD46P15529 392 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 IMPDH1P20839 514 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 EEF1DP29692 281 aaKnown RBP7.26□□□□□ -1.25
PNKP-229ENST00000637897 ARRB2P32121 409 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 SOX3P41225 446 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 CYB561P49447 251 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 CLCN2P51788 898 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 KRTAP10-9P60411 292 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 RPS13P62277 151 aaKnown RBP7.26□□□□□ -1.25
PNKP-229ENST00000637897 AP2B1P63010 937 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 ELF3P78545 371 aaPredicted RBP7.26□□□□□ -1.25
PNKP-229ENST00000637897 ALDH6A1Q02252 535 aaKnown RBP7.26□□□□□ -1.25
PNKP-229ENST00000637897 TRAF3Q13114 568 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 SLC13A2Q13183 592 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 ART3Q13508 389 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 RIPK1Q13546 671 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 PCBP2Q15366 365 aaKnown RBP eCLIP7.26□□□□□ -1.25
PNKP-229ENST00000637897 ELAVL1Q15717 326 aaKnown RBP7.26□□□□□ -1.25
PNKP-229ENST00000637897 PFKFB4Q16877 469 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 ZNF630Q2M218 657 aaPredicted RBP7.26□□□□□ -1.25
PNKP-229ENST00000637897 ZNF750Q32MQ0 723 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 KHDRBS2Q5VWX1 349 aaKnown RBP7.26□□□□□ -1.25
PNKP-229ENST00000637897 NIPAL1Q6NVV3 410 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 MED27Q6P2C8 311 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 TRIM40Q6P9F5 258 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 ACAD11Q709F0 780 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 GOLGA7Q7Z5G4 137 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 MRGPRGQ86SM5 289 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 C9orf40Q8IXQ3 194 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 ZNF595Q8IYB9 648 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 MMP21Q8N119 569 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 ARHGAP24Q8N264 748 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 TBC1D19Q8N5T2 526 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 ZNF781Q8N8C0 355 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 L3MBTL4Q8NA19 623 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 SLC2A12Q8TD20 617 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 PPWD1Q96BP3 646 aaKnown RBP7.26□□□□□ -1.25
PNKP-229ENST00000637897 SLC7A6OSQ96CW6 309 aaPredicted RBP7.26□□□□□ -1.25
PNKP-229ENST00000637897 NTNG2Q96CW9 530 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 L3HYPDHQ96EM0 354 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 VMP1Q96GC9 406 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 RASL10BQ96S79 203 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 MTERF1Q99551 399 aaKnown RBP7.26□□□□□ -1.25
PNKP-229ENST00000637897 EBF4Q9BQW3 602 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 BTBD10Q9BSF8 475 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 CCDC106Q9BWC9 280 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 LYRM4Q9HD34 91 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 ADAP2Q9NPF8 381 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 ARL8BQ9NVJ2 186 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.26□□□□□ -1.25
PNKP-229ENST00000637897 MYOTQ9UBF9 498 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 TAGLN3Q9UI15 199 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms