RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 FLYWCH1Q4VC44 716 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 AVPI1Q5T686 147 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 CST9LP1Q5W188 147 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 KIAA1161Q6NSJ0 714 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF705AQ6ZN79 300 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 CCDC116Q8IYX3 515 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ANKRD52Q8NB46 1076 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 OR56A3Q8NH54 315 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 OR51Q1Q8NH59 317 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 SLC29A3Q9BZD2 475 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 DPEP3Q9H4B8 488 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 CERS4Q9HA82 394 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 NMUR1Q9HB89 426 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 RAI2Q9Y5P3 530 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 POMT1Q9Y6A1 747 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 TMEM94Q12767 1356 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ANKRD30BLA7E2S9 258 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 DNM1LO00429 736 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 PHOX2AO14813 284 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 GYPCP04921 128 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 FGF4P08620 206 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 HLA-DOBP13765 273 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 FAHP16930 419 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 NDUFV2P19404 249 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 CD72P21854 359 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 PCBD1P61457 104 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 NT5DC1Q5TFE4 455 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 LRRC38Q5VT99 294 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 IDO2Q6ZQW0 420 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF662Q6ZS27 426 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ZCCHC23Q6ZST2 131 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 C3orf67Q6ZVT6 689 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 USP50Q70EL3 339 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 CILP2Q8IUL8 1156 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 SUMF2Q8NBJ7 301 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 PXYLP1Q8TE99 480 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 KCTD13Q8WZ19 329 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 NSUN4Q96CB9 384 aaKnown RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 AURKBQ96GD4 344 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 TIMD4Q96H15 378 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 RBM14Q96PK6 669 aaKnown RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 SOX17Q9H6I2 414 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 TPT1P8Q9HAU6 139 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 KLRG2A4D1S0 409 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 HELTA6NFD8 242 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 FFAR2O15552 330 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 PRPS1L1P21108 318 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 UGT1A4P22310 534 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 SHMT1P34896 483 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 PKP1Q13835 747 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 RFTN1Q14699 578 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ATXN7L3Q14CW9 347 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 UPP1Q16831 310 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ACSBG2Q5FVE4 666 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 FAM162BQ5T6X4 162 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 SPPL2CQ8IUH8 684 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ZNF597Q96LX8 424 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 OR52B2Q96RD2 323 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 LRRC4CQ9HCJ2 640 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 KCNJ16Q9NPI9 418 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 MYOTQ9UBF9 498 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 KLHL21Q9UJP4 597 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 CBY1Q9Y3M2 126 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 TESMINQ9Y4I5 508 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 TDRD15B5MCY1 1934 aaKnown RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ADCY10Q96PN6 1610 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 WASH4PA8MWX3 477 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 PLRG1O43660 514 aaKnown RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 JUPP14923 745 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 CTRB1P17538 263 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 OR1D2P34982 312 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 FKBP1BP68106 108 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 SLC25A3Q00325 362 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 PDGFRLQ15198 375 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 SLC25A52Q3SY17 297 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 FAM174BQ3ZCQ3 159 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 KIAA1614Q5VZ46 1190 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 CTRB2Q6GPI1 263 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 FRMPD2BQ6IN97 320 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 MRPL21Q7Z2W9 205 aaKnown RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 TWIST2Q8WVJ9 160 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 ARNTL2Q8WYA1 636 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 SLC25A44Q96H78 314 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 OR51E2Q9H255 320 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 RXFP3Q9NSD7 469 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 GLTPQ9NZD2 209 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 CAMK2AQ9UQM7 478 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 POMPQ9Y244 141 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 SLC6A5Q9Y345 797 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 CMAHPQ9Y471 501 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 MED14O60244 1454 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 POLR2AP24928 1970 aaKnown RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 A0A096LPI6 279 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 NOTOA8MTQ0 251 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 J3QRK9 145 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 MANBAO00462 879 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 RRP8O43159 456 aaKnown RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 STBD1O95210 358 aa5.78□□□□□ -1.48
SCN1A-212ENST00000636194 FBLP22087 321 aaKnown RBP5.78□□□□□ -1.48
SCN1A-212ENST00000636194 PKLRP30613 574 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms