RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 COPS8Q99627 209 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 NPAS2Q99743 824 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 ASH2LQ9UBL3 628 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 ACSL5Q9ULC5 683 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 DTNAQ9Y4J8 743 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 NF1P21359 2839 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 SNRNP200O75643 2136 aaKnown RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 CCDC162PA2VCL2 907 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 CCDC154A6NI56 674 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 H3BS24 57 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 SRP72O76094 671 aaKnown RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 GOT2P00505 430 aaKnown RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 F13BP05160 661 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 ENO3P13929 434 aaPredicted RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 ZNF37AP17032 561 aaPredicted RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 ITGALP20701 1170 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 ZNF140P52738 457 aaPredicted RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 RAB1AP62820 205 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 HERVK_113P63132 956 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 KIR3DS1Q14943 382 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 MAPRE2Q15555 327 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 ADRM1Q16186 407 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 NKAIN1Q4KMZ8 207 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 FAAH2Q6GMR7 532 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 RPS27LQ71UM5 84 aaKnown RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 LDB1Q86U70 411 aaPredicted RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 AMIGO1Q86WK6 493 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 MCEMP1Q8IX19 187 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 DDHD1Q8NEL9 900 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 BHLHE22Q8NFJ8 381 aaPredicted RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 OR5AR1Q8NGP9 310 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 RHEBL1Q8TAI7 183 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 SKA2Q8WVK7 121 aaPredicted RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 LRTOMTQ8WZ04 291 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 DNAJC1Q96KC8 554 aaKnown RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 VPS35Q96QK1 796 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 ATOH8Q96SQ7 321 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 MESP1Q9BRJ9 268 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 NDC1Q9BTX1 674 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 ERVK-6Q9BXR3 956 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 ALG9Q9H6U8 611 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 ZNF552Q9H707 407 aaPredicted RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 C7orf69Q9H7B7 122 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 ZMAT3Q9HA38 289 aaKnown RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 HACD3Q9P035 362 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 STOX2Q9P2F5 926 aaPredicted RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 CD300AQ9UGN4 299 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 BCAP29Q9UHQ4 241 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 DUSP13Q9UII6 198 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 MED16Q9Y2X0 877 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 MAU2Q9Y6X3 613 aa4.57□□□□□ -1.68
LINC00550-201ENST00000629293 PRRC2AP48634 2157 aaKnown RBP4.57□□□□□ -1.68
LINC00550-201ENST00000629293 TRGV8A0A0C4DH27 118 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 C2orf74A8MZ97 194 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 PSMD12O00232 456 aaPredicted RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 FFAR3O14843 346 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 UBDO15205 165 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 GPR42O15529 346 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ZSCAN9O15535 394 aaPredicted RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 EIF2S1P05198 315 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 FGF4P08620 206 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ALDOCP09972 364 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ZCCHC18P0CG32 403 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 MRPL19P49406 292 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 MAP2K6P52564 334 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 KCNK10P57789 538 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 PSME3P61289 254 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 PRAMEP78395 509 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 IRX1P78414 480 aaPredicted RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 DCDP81605 110 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 MED21Q13503 144 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ART3Q13508 389 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 FASTKQ14296 549 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 PDK3Q15120 406 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 OR4D1Q15615 310 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 LRRC36Q1X8D7 754 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 SYTL3Q4VX76 610 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 C6orf10Q5SRN2 563 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 FAM219BQ5XKK7 198 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 KANK2Q63ZY3 851 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 SP5Q6BEB4 398 aaPredicted RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 CATSPER1Q8NEC5 780 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 OR2L2Q8NH16 312 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 OR8K5Q8NH50 307 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ZFAND2BQ8WV99 257 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 MAP6Q96JE9 813 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 PKP2Q99959 881 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 RAB33BQ9H082 229 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 SPHK1Q9NYA1 384 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 TMEM181Q9P2C4 612 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 FBXL4Q9UKA2 621 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 CNOT11Q9UKZ1 510 aaKnown RBP4.56□□□□□ -1.68
LINC00550-201ENST00000629293 RAB26Q9ULW5 256 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 BTRCQ9Y297 605 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 CROCCQ5TZA2 2017 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 ROS1P08922 2347 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 C15orf38-AP3S2A0A0A6YYH1 394 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 TCRBV3S1A0A5B6 114 aa4.56□□□□□ -1.68
LINC00550-201ENST00000629293 E7ENX8 843 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms