RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 OR4A15Q8NGL6 344 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 UCN3Q969E3 161 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 UTP4Q969X6 686 aaKnown RBP10.73□□□□□ -0.69
SLIRP-212ENST00000613856 TMEM125Q96AQ2 219 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 TBC1D20Q96BZ9 403 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 CNRIP1Q96F85 164 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-212ENST00000613856 LRFN5Q96NI6 719 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 AMDHD1Q96NU7 426 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 ANKRD27Q96NW4 1050 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 CPPED1Q9BRF8 314 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-212ENST00000613856 SLC39A3Q9BRY0 314 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 ZPBPQ9BS86 351 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 IL1RL2Q9HB29 575 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 ZNF304Q9HCX3 659 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 APMAPQ9HDC9 416 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 TAS2R9Q9NYW1 312 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 VAPAQ9P0L0 249 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 SLAMF8Q9P0V8 285 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 TMEM181Q9P2C4 612 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 PISDQ9UG56 409 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 NDOR1Q9UHB4 597 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 VPS4AQ9UN37 437 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 PCDHGB4Q9UN71 923 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 AP3M1Q9Y2T2 418 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 LOXL2Q9Y4K0 774 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 MMACHCQ9Y4U1 282 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 PCDHB14Q9Y5E9 798 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 ZNF780BQ9Y6R6 833 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 USP9XQ93008 2570 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-212ENST00000613856 USP9YO00507 2555 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-212ENST00000613856 IGLV3-12A0A075B6K2 115 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 SYNDIG1LA6NDD5 238 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 DNAJA2O60884 412 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 ERAL1O75616 437 aaKnown RBP10.72□□□□□ -0.69
SLIRP-212ENST00000613856 SLITRK5O94991 958 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 ANP32DO95626 131 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 GPR75O95800 540 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 ITGB2P05107 769 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 FHP07954 510 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 CCL4P13236 92 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 ALAS2P22557 587 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 PPIBP23284 216 aaKnown RBP10.72□□□□□ -0.69
SLIRP-212ENST00000613856 RORAP35398 523 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 XCR1P46094 333 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 MANFP55145 182 aaKnown RBP10.72□□□□□ -0.69
SLIRP-212ENST00000613856 HSD17B7P56937 341 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 HBA1P69905 142 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 IGLV3-21P80748 117 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-212ENST00000613856 MAT1AQ00266 395 aaKnown RBP10.72□□□□□ -0.69
SLIRP-212ENST00000613856 FOLH1Q04609 750 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 GAB1Q13480 694 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 CAPRIN1Q14444 709 aaKnown RBP10.72□□□□□ -0.69
SLIRP-212ENST00000613856 GTDC1Q4AE62 458 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 RUNDC3AQ59EK9 446 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 PIGGQ5H8A4 983 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 SAMD4BQ5PRF9 694 aaKnown RBP10.72□□□□□ -0.69
SLIRP-212ENST00000613856 CPZQ66K79 652 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 NANOGP8Q6NSW7 305 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 CEACAM20Q6UY09 585 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 TMEM64Q6YI46 380 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 RAB11FIP2Q7L804 512 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 SCUBE1Q8IWY4 988 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 SLC15A3Q8IY34 581 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 ULK2Q8IYT8 1036 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 LRRC25Q8N386 305 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-212ENST00000613856 METTL27Q8N6F8 245 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-212ENST00000613856 TRIML2Q8N7C3 387 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 TMEM52Q8NDY8 209 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 C7orf57Q8NEG2 295 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 OR51Q1Q8NH59 317 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 SUN3Q8TAQ9 357 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 PEX11GQ96HA9 241 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 BBS4Q96RK4 519 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 SH3GL1Q99961 368 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 DPH2Q9BQC3 489 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-212ENST00000613856 THTPAQ9BU02 230 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 DDA1Q9BW61 102 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 SLC7A5P2Q9GIP4 190 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 GLIPR2Q9H4G4 154 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 NANOGQ9H9S0 305 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 MKKSQ9NPJ1 570 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-212ENST00000613856 SLC6A13Q9NSD5 602 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 SIRT3Q9NTG7 399 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-212ENST00000613856 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-212ENST00000613856 ERVK-11Q9UQG0 969 aa10.72□□□□□ -0.69
SLIRP-212ENST00000613856 SPTAN1Q13813 2472 aaKnown RBP10.72□□□□□ -0.69
SLIRP-212ENST00000613856 ANKRD65E5RJM6 399 aa10.71□□□□□ -0.69
SLIRP-212ENST00000613856 FAM227AF5H4B4 570 aa10.71□□□□□ -0.69
SLIRP-212ENST00000613856 NME4O00746 187 aa10.71□□□□□ -0.69
SLIRP-212ENST00000613856 CLDN4O14493 209 aa10.71□□□□□ -0.69
SLIRP-212ENST00000613856 FGF17O60258 216 aa10.71□□□□□ -0.69
SLIRP-212ENST00000613856 CTNSO60931 367 aa10.71□□□□□ -0.69
SLIRP-212ENST00000613856 CPSF4O95639 269 aaKnown RBP10.71□□□□□ -0.69
SLIRP-212ENST00000613856 NTRK1P04629 796 aa10.71□□□□□ -0.69
SLIRP-212ENST00000613856 ATP1B1P05026 303 aa10.71□□□□□ -0.69
SLIRP-212ENST00000613856 ATXN8OSP0DMR3 200 aa10.71□□□□□ -0.69
SLIRP-212ENST00000613856 HSD17B1P14061 328 aa10.71□□□□□ -0.69
SLIRP-212ENST00000613856 CPMP14384 443 aa10.71□□□□□ -0.69
SLIRP-212ENST00000613856 EFNA1P20827 205 aaPredicted RBP10.71□□□□□ -0.69
SLIRP-212ENST00000613856 UQCRC2P22695 453 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms