RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 OVCA2Q8WZ82 227 aa19.35■□□□□ 0.69
SSBP3-216ENST00000610401 ECHDC3Q96DC8 303 aa19.35■□□□□ 0.69
SSBP3-216ENST00000610401 CCDC32Q9BV29 185 aa19.35■□□□□ 0.69
SSBP3-216ENST00000610401 FNDC11Q9BVV2 318 aa19.35■□□□□ 0.69
SSBP3-216ENST00000610401 SLC22A4Q9H015 551 aa19.35■□□□□ 0.69
SSBP3-216ENST00000610401 MYO9BQ13459 2157 aa19.35■□□□□ 0.69
SSBP3-216ENST00000610401 FAM183AA6NL82 134 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 CA12O43570 354 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 MYL12AP19105 171 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 QPRTQ15274 297 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 MTFR2Q6P444 385 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 OR52I1Q8NGK6 324 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 SMAP2Q8WU79 429 aaPredicted RBP19.34■□□□□ 0.69
SSBP3-216ENST00000610401 SLC7A6Q92536 515 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 ATG2BQ96BY7 2078 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 FAM25AB3EWG3 89 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 FAM25CB3EWG5 89 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 FAM25GB3EWG6 89 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 ZNF670-ZNF695F2Z2N8 137 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 SLC2A2P11168 524 aaPredicted RBP19.34■□□□□ 0.69
SSBP3-216ENST00000610401 TIMP2P16035 220 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 MMP11P24347 488 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 GALK2Q01415 458 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 FCHO2Q0JRZ9 810 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 SAXO2Q658L1 398 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 PGBD2Q6P3X8 592 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 Q8N402 240 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 OR4K5Q8NGD3 323 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 SLC5A11Q8WWX8 675 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 FAM240BA0A1B0GVZ2 78 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 PRR23AA6NEV1 266 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 EEF1A2Q05639 463 aaKnown RBP19.34■□□□□ 0.69
SSBP3-216ENST00000610401 MESP2Q0VG99 397 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 PHF21AQ96BD5 680 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 FCRL1Q96LA6 429 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 LYSMD1Q96S90 227 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 BRF2Q9HAW0 419 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 HSPB11Q9Y547 144 aa19.34■□□□□ 0.69
SSBP3-216ENST00000610401 FAM71E1Q6IPT2 247 aa19.33■□□□□ 0.69
SSBP3-216ENST00000610401 ZER1Q7Z7L7 766 aa19.33■□□□□ 0.69
SSBP3-216ENST00000610401 ADGRF3Q8IZF5 1079 aa19.33■□□□□ 0.69
SSBP3-216ENST00000610401 SNAPC3Q92966 411 aa19.33■□□□□ 0.69
SSBP3-216ENST00000610401 ZG16BQ96DA0 208 aa19.33■□□□□ 0.69
SSBP3-216ENST00000610401 TREX2Q9BQ50 279 aaPredicted RBP19.33■□□□□ 0.69
SSBP3-216ENST00000610401 THSD1Q9NS62 852 aa19.33■□□□□ 0.69
SSBP3-216ENST00000610401 CXXC1Q9P0U4 656 aaPredicted RBP19.33■□□□□ 0.69
SSBP3-216ENST00000610401 SEC14L4Q9UDX3 406 aa19.33■□□□□ 0.69
SSBP3-216ENST00000610401 RPL36Q9Y3U8 105 aaKnown RBP19.33■□□□□ 0.69
SSBP3-216ENST00000610401 SCN2AQ99250 2005 aa19.33■□□□□ 0.68
SSBP3-216ENST00000610401 ISM1B1AKI9 464 aa19.33■□□□□ 0.68
SSBP3-216ENST00000610401 PLA2G10O15496 165 aa19.33■□□□□ 0.68
SSBP3-216ENST00000610401 MMP20O60882 483 aa19.33■□□□□ 0.68
SSBP3-216ENST00000610401 NTHL1P78549 312 aa19.33■□□□□ 0.68
SSBP3-216ENST00000610401 SLC30A6Q6NXT4 461 aa19.33■□□□□ 0.68
SSBP3-216ENST00000610401 CNIH2Q6PI25 160 aa19.33■□□□□ 0.68
SSBP3-216ENST00000610401 OR56A3Q8NH54 315 aa19.33■□□□□ 0.68
SSBP3-216ENST00000610401 BEX1Q9HBH7 125 aa19.33■□□□□ 0.68
SSBP3-216ENST00000610401 GALNT9Q9HCQ5 603 aa19.33■□□□□ 0.68
SSBP3-216ENST00000610401 MAU2Q9Y6X3 613 aa19.33■□□□□ 0.68
SSBP3-216ENST00000610401 ZC3H12DA2A288 527 aaKnown RBP19.32■□□□□ 0.68
SSBP3-216ENST00000610401 CPSF4LA6NMK7 179 aaKnown RBP19.32■□□□□ 0.68
SSBP3-216ENST00000610401 WASH3PC4AMC7 463 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 PLPP1O14494 284 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 GRM6O15303 877 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 LALBAP00709 142 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 VIPR1P32241 457 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 SLC16A1P53985 500 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 LASP1Q14847 261 aaKnown RBP19.32■□□□□ 0.68
SSBP3-216ENST00000610401 SYT14P1Q58G82 188 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 DDI2Q5TDH0 399 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 MLIPQ5VWP3 458 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 ZNF770Q6IQ21 691 aaPredicted RBP19.32■□□□□ 0.68
SSBP3-216ENST00000610401 OR6T1Q8NGN1 323 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 CREB3L4Q8TEY5 395 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 POP5Q969H6 163 aaKnown RBP19.32■□□□□ 0.68
SSBP3-216ENST00000610401 HDHD2Q9H0R4 259 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 UCKL1Q9NWZ5 548 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 PLEKHB1Q9UF11 243 aaPredicted RBP19.32■□□□□ 0.68
SSBP3-216ENST00000610401 ATP6V1HQ9UI12 483 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 STOML2Q9UJZ1 356 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 SCN3AQ9NY46 2000 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 TGM5O43548 720 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 SOD2P04179 222 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 FABP5Q01469 135 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 NCF4Q15080 339 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 CDKL4Q5MAI5 379 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 SMARCD3Q6STE5 483 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 NANOGP1Q8N7R0 232 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 RNFT2Q96EX2 444 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 KATNB1Q9BVA0 655 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 XKR8Q9H6D3 395 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 RNF121Q9H920 327 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 MCUBQ9NWR8 336 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 A3GALT2U3KPV4 340 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 ALPK2Q86TB3 2170 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 BTBD16Q32M84 506 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 TRIM69Q86WT6 500 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 JPH3Q8WXH2 748 aaPredicted RBP19.32■□□□□ 0.68
SSBP3-216ENST00000610401 KCTD7Q96MP8 289 aa19.32■□□□□ 0.68
SSBP3-216ENST00000610401 C17orf62Q9BQA9 187 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms