RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	ZFP64	Q9NPA5	681 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	ZNF358	Q9NW07	568 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	ASB4	Q9Y574	426 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	DOCK7	Q96N67	2140 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223		A0A1W2PR48	441 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	HMX2	A2RU54	273 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	PROM1	O43490	865 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	CTAG2	O75638	210 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	AIFM1	O95831	613 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	LTA4H	P09960	611 aa	Known RBP	13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	NR2F6	P10588	404 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	CD1E	P15812	388 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	SSTR4	P31391	388 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	SPR	P35270	261 aa	Predicted RBP	13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	BSG	P35613	385 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	TRPC1	P48995	793 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	ZNF267	Q14586	743 aa	Predicted RBP	13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	SETDB1	Q15047	1291 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	SLC25A35	Q3KQZ1	300 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	UBAP2	Q5T6F2	1119 aa	Known RBP	13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	RIPPLY2	Q5TAB7	128 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	GRTP1	Q5TC63	336 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	FAM219B	Q5XKK7	198 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	CYS1	Q717R9	158 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	CROCCP2	Q86T23	111 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	ULK2	Q8IYT8	1036 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	ST13P4	Q8IZP2	240 aa	Predicted RBP	13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	ZNF441	Q8N8Z8	693 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	FBF1	Q8TES7	1133 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	TANK	Q92844	425 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	RGMA	Q96B86	450 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	JSRP1	Q96MG2	331 aa	Predicted RBP	13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	GPATCH1	Q9BRR8	931 aa	Known RBP	13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	NMRAL1	Q9HBL8	299 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	MED4	Q9NPJ6	270 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	ALKBH4	Q9NXW9	302 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	PHF11	Q9UIL8	331 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	BOK	Q9UMX3	212 aa	Predicted RBP	13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	MPDZ	O75970	2070 aa		13.48	□□□□□ -0.25
IRF3-223	ENST00000599223	TRIM3	O75382	744 aa	Predicted RBP	13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	GBA	P04062	536 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	EPB42	P16452	691 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	PIK3CB	P42338	1070 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	PIK3CG	P48736	1102 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	FBXW4	P57775	412 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	IFFO1	Q0D2I5	559 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	NTRK2	Q16620	822 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	ACSF3	Q4G176	576 aa	Predicted RBP	13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	CES4A	Q5XG92	561 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	ARSK	Q6UWY0	536 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	LRIG3	Q6UXM1	1119 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	RNF111	Q6ZNA4	994 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	SLC15A4	Q8N697	577 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	NEIL3	Q8TAT5	605 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	RBM18	Q96H35	190 aa	Known RBP	13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	ART5	Q96L15	291 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	SH3GL2	Q99962	352 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	DOHH	Q9BU89	302 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	TEX10	Q9NXF1	929 aa	Predicted RBP	13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	MS4A12	Q9NXJ0	267 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	DNAJB12	Q9NXW2	375 aa	Known RBP	13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	CRIM1	Q9NZV1	1036 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	TSC22D4	Q9Y3Q8	395 aa		13.47	□□□□□ -0.25
IRF3-223	ENST00000599223	NAV3	Q8IVL0	2385 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223		H0YIV9	168 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	OR10H2	O60403	315 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	SIX3	O95343	332 aa	Predicted RBP	13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	GPR75	O95800	540 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	GSTA2	P09210	222 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	CT62	P0C5K7	136 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	HSD17B3	P37058	310 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	NEK2	P51955	445 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	CRYZ	Q08257	329 aa	Known RBP	13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	PFKFB4	Q16877	469 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	DCST1	Q5T197	706 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	FNDC7	Q5VTL7	733 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	POMZP3	Q6PJE2	187 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	SLC29A4	Q7RTT9	530 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	GOLGA7	Q7Z5G4	137 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	TNIP2	Q8NFZ5	429 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	WDR20	Q8TBZ3	569 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	RIT1	Q92963	219 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	ZNF597	Q96LX8	424 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	CXXC4	Q9H2H0	198 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	DDX31	Q9H8H2	851 aa	Known RBP	13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	ACTR8	Q9H981	624 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	ACKR4	Q9NPB9	350 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	CCM2L	Q9NUG4	571 aa	Predicted RBP	13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	CNIH4	Q9P003	139 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	RNF11	Q9Y3C5	154 aa		13.46	□□□□□ -0.25
IRF3-223	ENST00000599223	NIPBL	Q6KC79	2804 aa	eCLIP	13.45	□□□□□ -0.26	1e-8	■□□□□ 8.7
IRF3-223	ENST00000599223	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.45	□□□□□ -0.26
IRF3-223	ENST00000599223	IQANK1	A0A1B0GTG1	560 aa		13.45	□□□□□ -0.26
IRF3-223	ENST00000599223	DYRK3	O43781	588 aa		13.45	□□□□□ -0.26
IRF3-223	ENST00000599223	SASH3	O75995	380 aa		13.45	□□□□□ -0.26
IRF3-223	ENST00000599223	C2	P06681	752 aa		13.45	□□□□□ -0.26
IRF3-223	ENST00000599223	FAM58BP	P0C7Q3	252 aa		13.45	□□□□□ -0.26
IRF3-223	ENST00000599223	GABRA1	P14867	456 aa		13.45	□□□□□ -0.26

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