RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 PPIAP62937 165 aaKnown RBP12.18□□□□□ -0.46
H3F3B-213ENST00000593254 HERVK_113P63132 956 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 ERVK-8P63133 956 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 IFT88Q13099 833 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 ZNF791Q3KP31 576 aaPredicted RBP12.18□□□□□ -0.46
H3F3B-213ENST00000593254 TTC19Q6DKK2 380 aaPredicted RBP12.18□□□□□ -0.46
H3F3B-213ENST00000593254 OR52E8Q6IFG1 317 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 LETMD1Q6P1Q0 360 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 ARHGAP11AQ6P4F7 1023 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 LYPD8Q6UX82 237 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 C3P1Q6ZMU1 363 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 RGS9BPQ6ZS82 235 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 GK5Q6ZS86 529 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 TGIF2LYQ8IUE0 185 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 EID3Q8N140 333 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 METTL4Q8N3J2 472 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 SLC15A4Q8N697 577 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 MYRIPQ8NFW9 859 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 FAM57AQ8TBR7 257 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 SLC22A8Q8TCC7 542 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 UCN3Q969E3 161 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 FAM173AQ9BQD7 235 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 CNPPD1Q9BV87 410 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 ERVK-6Q9BXR3 956 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 MRPL1Q9BYD6 325 aaKnown RBP12.18□□□□□ -0.46
H3F3B-213ENST00000593254 TTTY12Q9BZ98 90 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 ELOVL6Q9H5J4 265 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 RYDENQ9NUL5 291 aaKnown RBP12.18□□□□□ -0.46
H3F3B-213ENST00000593254 ZNF225Q9UK10 706 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 ERVK-19Q9WJR5 959 aa12.18□□□□□ -0.46
H3F3B-213ENST00000593254 A0A1W2PS29 197 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 OR6C76A6NM76 312 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 FAM166BA8MTA8 275 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 G3V3Y1 287 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 ACOT7O00154 380 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 PGRMC2O15173 223 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 CLPSP04118 112 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 KLK1P06870 262 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 TPOP07202 933 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 CCL3P10147 92 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 NR0B1P51843 470 aaKnown RBP12.17□□□□□ -0.46
H3F3B-213ENST00000593254 CDH13P55290 713 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 PLGLB1Q02325 96 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 TFF3Q07654 80 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 FOXO1Q12778 655 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 ZNF267Q14586 743 aaPredicted RBP12.17□□□□□ -0.46
H3F3B-213ENST00000593254 EBPQ15125 230 aaKnown RBP12.17□□□□□ -0.46
H3F3B-213ENST00000593254 NDUFAF5Q5TEU4 345 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 RNF111Q6ZNA4 994 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 FAM47EQ6ZV65 393 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 SLC29A4Q7RTT9 530 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 PAGE2Q7Z2X7 111 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 CD163Q86VB7 1156 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 LCA5Q86VQ0 697 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 SLC22A16Q86VW1 577 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 DOK4Q8TEW6 326 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 CA5BP1Q8WTZ4 195 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 RIT1Q92963 219 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 SPACA9Q96E40 222 aaPredicted RBP12.17□□□□□ -0.46
H3F3B-213ENST00000593254 FOXC2Q99958 501 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 TXLNGYQ9BZA5 131 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 WWTR1Q9GZV5 400 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 DEFB127Q9H1M4 99 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 EPB41L4BQ9H329 900 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 CXorf21Q9HAI6 301 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 BRF2Q9HAW0 419 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 SH2D2AQ9NP31 389 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 FARSBQ9NSD9 589 aaKnown RBP12.17□□□□□ -0.46
H3F3B-213ENST00000593254 SACM1LQ9NTJ5 587 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 AHSPQ9NZD4 102 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 TMEM216Q9P0N5 145 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 FETUBQ9UGM5 382 aa12.17□□□□□ -0.46
H3F3B-213ENST00000593254 IQANK1A0A1B0GTG1 560 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 PDYNP01213 254 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 IGHG3P01860 377 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 P04436 131 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 FAM153BP0C7A2 387 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 RHOXF2BP0C7M4 288 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 TSPAN8P19075 237 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 TAC1P20366 129 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 PIK3R1P27986 724 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 HSD17B3P37058 310 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 DNASE1L1P49184 302 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 IST1P53990 364 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 CLCQ05315 142 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 GALNT1Q10472 559 aaPredicted RBP12.16□□□□□ -0.46
H3F3B-213ENST00000593254 HYAL4Q2M3T9 481 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 FAM153CQ494X1 144 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 SGO1Q5FBB7 561 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 ZNF678Q5SXM1 525 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 CCNYL2Q5T2Q4 361 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 PAOXQ6QHF9 649 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 COMMD6Q7Z4G1 85 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 DND1Q8IYX4 353 aaKnown RBP12.16□□□□□ -0.46
H3F3B-213ENST00000593254 TMEM251Q8N6I4 163 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 ZNF441Q8N8Z8 693 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 TRPC4APQ8TEL6 797 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 PAQR8Q8TEZ7 354 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 SELENOMQ8WWX9 145 aa12.16□□□□□ -0.46
H3F3B-213ENST00000593254 SDCCAG3Q96C92 435 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms