RNA–Protein interactions for RNA: ENST00000591461.1

PKN1-213, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-213	ENST00000591461	PCSK2	P16519	638 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	S1PR1	P21453	382 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	TRHR	P34981	398 aa	Predicted RBP	13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	CYB561	P49447	251 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	SSR4	P51571	173 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	WDR4	P57081	412 aa	Known RBP	13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	KCNK10	P57789	538 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	MRPS35	P82673	323 aa	Known RBP	13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	NNAT	Q16517	81 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	GALNTL6	Q49A17	601 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	RFTN2	Q52LD8	501 aa	Predicted RBP	13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	TRMT12	Q53H54	448 aa	Known RBP	13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	ATCAY	Q86WG3	371 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	LGI4	Q8N135	537 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	ARMC10	Q8N2F6	343 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	CPSF7	Q8N684	471 aa	Known RBP	13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	GALNT11	Q8NCW6	608 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	PPP1R14C	Q8TAE6	165 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	KAT2A	Q92830	837 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	PGM2	Q96G03	612 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	SCMH1	Q96GD3	660 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	FBXL20	Q96IG2	436 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	BRINP2	Q9C0B6	783 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	LRTM1	Q9HBL6	345 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	DEPP	Q9NTK1	212 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	SENP1	Q9P0U3	644 aa		13.56	□□□□□ -0.24
PKN1-213	ENST00000591461	PRRC2C	Q9Y520	2896 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	SLC28A1	O00337	649 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	PEX11A	O75192	247 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	SEMA7A	O75326	666 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	RSL1D1	O76021	490 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	FGF4	P08620	206 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	MYZAP	P0CAP1	466 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	CD46	P15529	392 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	TRA2B	P62995	288 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	SPRED3	Q2MJR0	410 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	PRICKLE4	Q2TBC4	344 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	PIGG	Q5H8A4	983 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	DESI1	Q6ICB0	168 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	FAM71E1	Q6IPT2	247 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	RPUSD3	Q6P087	351 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	GALNT18	Q6P9A2	607 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	FAM180A	Q6UWF9	173 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	LYPD8	Q6UX82	237 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	RNF111	Q6ZNA4	994 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	TICAM1	Q8IUC6	712 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	SULF2	Q8IWU5	870 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	GALNT12	Q8IXK2	581 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	PRR22	Q8IZ63	422 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	CLYBL	Q8N0X4	340 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	CYP4Z2P	Q8N1L4	340 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	ZNF781	Q8N8C0	355 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	ZNF615	Q8N8J6	731 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	OR5M3	Q8NGP4	307 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	OR9A2	Q8NGT5	310 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	ASB15	Q8WXK1	588 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	C5orf34	Q96MH7	638 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	TRMO	Q9BU70	441 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	FAIM2	Q9BWQ8	316 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	OLAH	Q9NV23	265 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	MAT2B	Q9NZL9	334 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	COPS7A	Q9UBW8	275 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	ERVK-11	Q9UQG0	969 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	YARS2	Q9Y2Z4	477 aa	Known RBP	13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	CNTRL	Q7Z7A1	2325 aa		13.55	□□□□□ -0.24
PKN1-213	ENST00000591461	TMEM120B	A0PK00	339 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	ANKUB1	A6NFN9	424 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461		A8MVJ9	347 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	LSM1	O15116	133 aa	Known RBP	13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	RGS14	O43566	566 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	NME2P1	O60361	137 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	GUCY1B2	O75343	617 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	CBX7	O95931	251 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	EFNA1	P20827	205 aa	Predicted RBP	13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	NME2	P22392	152 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	TDGF1P3	P51864	188 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	ABCE1	P61221	599 aa	Known RBP	13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	NAA20	P61599	178 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	RPL38	P63173	70 aa	Known RBP	13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	HSF1	Q00613	529 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	EBP	Q15125	230 aa	Known RBP	13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	BCORP1	Q8N888	145 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	OR52R1	Q8NGF1	315 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	TLCD1	Q96CP7	247 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	TSSK3	Q96PN8	268 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	SORT1	Q99523	831 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	C1orf50	Q9BV19	199 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	WWTR1	Q9GZV5	400 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	OR10A5	Q9H207	317 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	EML4	Q9HC35	981 aa	Known RBP	13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	SSU72	Q9NP77	194 aa	Known RBP	13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	PNPO	Q9NVS9	261 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	HPF1	Q9NWY4	346 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	C1orf109	Q9NX04	203 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	SIRT5	Q9NXA8	310 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	BCAP29	Q9UHQ4	241 aa		13.54	□□□□□ -0.24
PKN1-213	ENST00000591461	ZNF780B	Q9Y6R6	833 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms