RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 SLAMF7Q9NQ25 335 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 COPS7AQ9UBW8 275 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 PCDHGB4Q9UN71 923 aa12.72□□□□□ -0.37
VMP1-210ENST00000589823 ACACAQ13085 2346 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 PRSS51A0A1B0GVH4 220 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 DYTNA2CJ06 578 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 CCDC154A6NI56 674 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 ARGFXA6NJG6 315 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 NR5A2O00482 541 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 SLC22A2O15244 555 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 CFLARO15519 480 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 DCTN3O75935 186 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 SLITRK5O94991 958 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 EFNA1P20827 205 aaPredicted RBP12.71□□□□□ -0.37
VMP1-210ENST00000589823 SLC26A5P58743 744 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 AP2B1P63010 937 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 LRRC74AQ0VAA2 488 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 MAP4K2Q12851 820 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 KLF10Q13118 480 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 UBAP2LQ14157 1087 aaKnown RBP12.71□□□□□ -0.37
VMP1-210ENST00000589823 RCAN2Q14206 197 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 MLC1Q15049 377 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 MAPRE2Q15555 327 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 PRICKLE4Q2TBC4 344 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 DEFB109BQ30KR1 87 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 TIGD2Q4W5G0 525 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 PLAG1Q6DJT9 500 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 BLOC1S3Q6QNY0 202 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 DGAT2L6Q6ZPD8 337 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 MSANTD1Q6ZTZ1 278 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 ZNF551Q7Z340 670 aaPredicted RBP12.71□□□□□ -0.37
VMP1-210ENST00000589823 ANKS4BQ8N8V4 417 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 B3GNT7Q8NFL0 401 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 ADCY4Q8NFM4 1077 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 OR9A2Q8NGT5 310 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 M1APQ8TC57 530 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 SLC2A12Q8TD20 617 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 ZNF675Q8TD23 568 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 SPDL1Q96EA4 605 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 IMMP1LQ96LU5 166 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 OR8D2Q9GZM6 311 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 RMND5AQ9H871 391 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 NEUROD4Q9HD90 331 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 ATP13A2Q9NQ11 1180 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.71□□□□□ -0.37
VMP1-210ENST00000589823 MAT2BQ9NZL9 334 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 ZMIZ1Q9ULJ6 1067 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 ERVK-19Q9WJR5 959 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 CAPN7Q9Y6W3 813 aa12.71□□□□□ -0.37
VMP1-210ENST00000589823 FRYQ5TBA9 3013 aa12.71□□□□□ -0.38
VMP1-210ENST00000589823 BCAS2O75934 225 aaPredicted RBP12.7□□□□□ -0.38
VMP1-210ENST00000589823 C6orf47O95873 294 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 SNRPB2P08579 225 aaKnown RBP12.7□□□□□ -0.38
VMP1-210ENST00000589823 CT62P0C5K7 136 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 PTGER1P34995 402 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 ZFP36L2P47974 494 aaKnown RBP12.7□□□□□ -0.38
VMP1-210ENST00000589823 WNT3P56703 355 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 AIMP2Q13155 320 aaKnown RBP12.7□□□□□ -0.38
VMP1-210ENST00000589823 MAPKAPK3Q16644 382 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 ZNF628Q5EBL2 1059 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 DCAF10Q5QP82 559 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 FAM111BQ6SJ93 734 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 TMEM107Q6UX40 140 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 GK5Q6ZS86 529 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 ANKRD46Q86W74 232 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 FUNDC1Q8IVP5 155 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 KBTBD2Q8IY47 623 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 NFAM1Q8NET5 270 aaPredicted RBP12.7□□□□□ -0.38
VMP1-210ENST00000589823 OR7G1Q8NGA0 311 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 OR4A15Q8NGL6 344 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 OR1N1Q8NGS0 311 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 DOK4Q8TEW6 326 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 KAT2AQ92830 837 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 NCLNQ969V3 563 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 VPS33AQ96AX1 596 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 ERP27Q96DN0 273 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 VMP1Q96GC9 406 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 SENP5Q96HI0 755 aaPredicted RBP12.7□□□□□ -0.38
VMP1-210ENST00000589823 FBXL20Q96IG2 436 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 C3orf14Q9HBI5 128 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 DDX18Q9NVP1 670 aaKnown RBP12.7□□□□□ -0.38
VMP1-210ENST00000589823 ARMCX1Q9P291 453 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 PTGFRNQ9P2B2 879 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 BTNL2Q9UIR0 455 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 URB1O60287 2271 aaKnown RBP12.7□□□□□ -0.38
VMP1-210ENST00000589823 IGF2RP11717 2491 aa12.7□□□□□ -0.38
VMP1-210ENST00000589823 PLOD2O00469 737 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 CPSF4O95639 269 aaKnown RBP12.69□□□□□ -0.38
VMP1-210ENST00000589823 DDAH2O95865 285 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 SERPINA7P05543 415 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 ABCB1P08183 1280 aaPredicted RBP12.69□□□□□ -0.38
VMP1-210ENST00000589823 IFI6P09912 130 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 SOAT1P35610 550 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 CDK9P50750 372 aaKnown RBP12.69□□□□□ -0.38
VMP1-210ENST00000589823 CLCN2P51788 898 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 CXADRP78310 365 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 PHC1P78364 1004 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 MRPS35P82673 323 aaKnown RBP12.69□□□□□ -0.38
VMP1-210ENST00000589823 FUT7Q11130 342 aa12.69□□□□□ -0.38
VMP1-210ENST00000589823 SPDYE7PQ495Y7 208 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms