RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 CDRT15Q96T59 188 aa16.55■□□□□ 0.24
TMED1-205ENST00000589638 SPSB2Q99619 263 aa16.55■□□□□ 0.24
TMED1-205ENST00000589638 CRB3Q9BUF7 120 aa16.55■□□□□ 0.24
TMED1-205ENST00000589638 THUMPD3Q9BV44 507 aaKnown RBP16.55■□□□□ 0.24
TMED1-205ENST00000589638 SPRY4Q9C004 299 aa16.55■□□□□ 0.24
TMED1-205ENST00000589638 SLC26A1Q9H2B4 701 aa16.55■□□□□ 0.24
TMED1-205ENST00000589638 ANKRA2Q9H9E1 313 aa16.55■□□□□ 0.24
TMED1-205ENST00000589638 SPAG4Q9NPE6 437 aa16.55■□□□□ 0.24
TMED1-205ENST00000589638 CMTM6Q9NX76 183 aa16.55■□□□□ 0.24
TMED1-205ENST00000589638 C3orf18Q9UK00 162 aa16.55■□□□□ 0.24
TMED1-205ENST00000589638 L3MBTL1Q9Y468 752 aa16.55■□□□□ 0.24
TMED1-205ENST00000589638 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.55■□□□□ 0.24
TMED1-205ENST00000589638 C15orf38-AP3S2A0A0A6YYH1 394 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 IDSB3KWA1 339 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 CLIC1O00299 241 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 RAD1O60671 282 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 PDE5AO76074 875 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 ATP1B1P05026 303 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 STT3AP46977 705 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 CCT3P49368 545 aaKnown RBP16.54■□□□□ 0.24
TMED1-205ENST00000589638 PRKAG1P54619 331 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 EMP2P54851 167 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 CASP9P55211 416 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 KCNJ2P63252 427 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 NSDHLQ15738 373 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 ZNF628Q5EBL2 1059 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 C6orf163Q5TEZ5 329 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 LANCL3Q6ZV70 420 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 ARPINQ7Z6K5 226 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 SLC15A3Q8IY34 581 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 ST13P4Q8IZP2 240 aaPredicted RBP16.54■□□□□ 0.24
TMED1-205ENST00000589638 ESX1Q8N693 406 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 RNF148Q8N7C7 305 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 ENDOVQ8N8Q3 282 aaKnown RBP16.54■□□□□ 0.24
TMED1-205ENST00000589638 PLPP5Q8NEB5 264 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 PSMA8Q8TAA3 256 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 ZFP90Q8TF47 636 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 ELP4Q96EB1 424 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 FAM120BQ96EK7 910 aaKnown RBP16.54■□□□□ 0.24
TMED1-205ENST00000589638 PHF12Q96QT6 1004 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 IKZF5Q9H5V7 419 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 TPT1P8Q9HAU6 139 aa16.54■□□□□ 0.24
TMED1-205ENST00000589638 ZCCHC3Q9NUD5 404 aaKnown RBP16.54■□□□□ 0.24
TMED1-205ENST00000589638 PTRH2Q9Y3E5 179 aaKnown RBP16.54■□□□□ 0.24
TMED1-205ENST00000589638 IGKV3D-11A0A0A0MRZ8 115 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 EVPLLA8MZ36 301 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 NME4O00746 187 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 ALOX12BO75342 701 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 CT62P0C5K7 136 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 TCN2P20062 427 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 PGDP52209 483 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 TP53BP2Q13625 1128 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 PRICKLE4Q2TBC4 344 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 CPZQ66K79 652 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 ZNF517Q6ZMY9 492 aaPredicted RBP16.53■□□□□ 0.24
TMED1-205ENST00000589638 GALNT12Q8IXK2 581 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 NLGN4XQ8N0W4 816 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 NLGN4YQ8NFZ3 816 aaPredicted RBP16.53■□□□□ 0.24
TMED1-205ENST00000589638 OR7G2Q8NG99 324 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 OR8J3Q8NGG0 315 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 RIT1Q92963 219 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 PELOQ9BRX2 385 aaKnown RBP16.53■□□□□ 0.24
TMED1-205ENST00000589638 PIF1Q9H611 641 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 WDR54Q9H977 334 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 DDX18Q9NVP1 670 aaKnown RBP16.53■□□□□ 0.24
TMED1-205ENST00000589638 MAT2BQ9NZL9 334 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 TMEM181Q9P2C4 612 aa16.53■□□□□ 0.24
TMED1-205ENST00000589638 GMPR2Q9P2T1 348 aaKnown RBP16.53■□□□□ 0.24
TMED1-205ENST00000589638 NXT1Q9UKK6 140 aaKnown RBP16.53■□□□□ 0.24
TMED1-205ENST00000589638 PRPF19Q9UMS4 504 aaKnown RBP16.53■□□□□ 0.24
TMED1-205ENST00000589638 FER1L5A0AVI2 2057 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 TCRBV16S1A1N1A0A5B0 115 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 C17orf105B2RV13 164 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 STMND1H3BQB6 276 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 EMC8O43402 210 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 KRT75O95678 551 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 OR4D2P58180 307 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 MGAT2Q10469 447 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 BIKQ13323 160 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 ZNF267Q14586 743 aaPredicted RBP16.52■□□□□ 0.24
TMED1-205ENST00000589638 TRMT12Q53H54 448 aaKnown RBP16.52■□□□□ 0.24
TMED1-205ENST00000589638 TMEM64Q6YI46 380 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 C6orf120Q7Z4R8 191 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 RNF130Q86XS8 419 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 NUP43Q8NFH3 380 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 SFXN5Q8TD22 340 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 METTL21AQ8WXB1 218 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 FAM122AQ96E09 287 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 SLC35G5Q96KT7 338 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 SH3GL1Q99961 368 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 CNPPD1Q9BV87 410 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 B3GNT4Q9C0J1 378 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 EPS8L2Q9H6S3 715 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 CXorf21Q9HAI6 301 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 C3orf14Q9HBI5 128 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 ABCD2Q9UBJ2 740 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 AK5Q9Y6K8 562 aa16.52■□□□□ 0.24
TMED1-205ENST00000589638 CNOT1A5YKK6 2376 aaKnown RBP16.52■□□□□ 0.23
TMED1-205ENST00000589638 IGHV3-20A0A0C4DH32 117 aa16.51■□□□□ 0.23
TMED1-205ENST00000589638 UPK1AO00322 258 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms