RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 SAXO2Q658L1 398 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 FAM199XQ6PEV8 388 aaPredicted RBP10.59□□□□□ -0.71
VMP1-207ENST00000588131 FAM111BQ6SJ93 734 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 TMEM64Q6YI46 380 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 QSOX2Q6ZRP7 698 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 SHISA6Q6ZSJ9 500 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 OVCH1Q7RTY7 1134 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 LAPTM4BQ86VI4 370 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 IFNEQ86WN2 208 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 CALHM3Q86XJ0 350 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 TRIML2Q8N7C3 387 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 GALNT6Q8NCL4 622 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 SIMC1Q8NDZ2 872 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 OR7G2Q8NG99 324 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 OR10A6Q8NH74 314 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 WDR36Q8NI36 951 aaKnown RBP10.59□□□□□ -0.71
VMP1-207ENST00000588131 STT3BQ8TCJ2 826 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 WDR60Q8WVS4 1066 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 ELP4Q96EB1 424 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 FAM120BQ96EK7 910 aaKnown RBP10.59□□□□□ -0.71
VMP1-207ENST00000588131 MAGED4Q96JG8 741 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 ZNF583Q96ND8 569 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 LRFN5Q96NI6 719 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 PTCHD1Q96NR3 888 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 SH3GL1Q99961 368 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 DPH2Q9BQC3 489 aaPredicted RBP10.59□□□□□ -0.71
VMP1-207ENST00000588131 DDA1Q9BW61 102 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 ALOXE3Q9BYJ1 711 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 TGIF2Q9GZN2 237 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 PCDHAC1Q9H158 963 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 CHST8Q9H2A9 424 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 ALG2Q9H553 416 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 MAT2BQ9NZL9 334 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 POMPQ9Y244 141 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 MMACHCQ9Y4U1 282 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 VSTM2BA6NLU5 285 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 EVPLLA8MZ36 301 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 OR10H2O60403 315 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 STK17BO94768 372 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 KCNK5O95279 499 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 NUDT7P0C024 238 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 ZGLP1P0C6A0 271 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 GPX2P18283 190 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 AGXTP21549 392 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 IL10P22301 178 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 PPIBP23284 216 aaKnown RBP10.58□□□□□ -0.72
VMP1-207ENST00000588131 SOX11P35716 441 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 STT3AP46977 705 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 CCT3P49368 545 aaKnown RBP10.58□□□□□ -0.72
VMP1-207ENST00000588131 OR4D2P58180 307 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 RPS26P62854 115 aaKnown RBP10.58□□□□□ -0.72
VMP1-207ENST00000588131 TP53BP2Q13625 1128 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 RGNQ15493 299 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 NKG7Q16617 165 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 PRICKLE4Q2TBC4 344 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 TRMT12Q53H54 448 aaKnown RBP10.58□□□□□ -0.72
VMP1-207ENST00000588131 FHL5Q5TD97 284 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 MRPL14Q6P1L8 145 aaKnown RBP10.58□□□□□ -0.72
VMP1-207ENST00000588131 FAM198BQ6UWH4 519 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 ANGPTL8Q6UXH0 198 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 SZRD1Q7Z422 152 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 C6orf120Q7Z4R8 191 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 RNF130Q86XS8 419 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 ST13P4Q8IZP2 240 aaPredicted RBP10.58□□□□□ -0.72
VMP1-207ENST00000588131 CACTIN-AS1Q8N1I8 211 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 OR52N2Q8NGI0 321 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 SFXN5Q8TD22 340 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 MR1Q95460 341 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 NEURL3Q96EH8 262 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 DGAT2Q96PD7 388 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 KCTD14Q9BQ13 255 aaPredicted RBP10.58□□□□□ -0.72
VMP1-207ENST00000588131 ECSITQ9BQ95 431 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 ZPBPQ9BS86 351 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 VN1R1Q9GZP7 353 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 SERHL2Q9H4I8 314 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 SOX17Q9H6I2 414 aaPredicted RBP10.58□□□□□ -0.72
VMP1-207ENST00000588131 SEMA3GQ9NS98 782 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 ZCCHC3Q9NUD5 404 aaKnown RBP10.58□□□□□ -0.72
VMP1-207ENST00000588131 FOXJ2Q9P0K8 574 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 IFT80Q9P2H3 777 aaPredicted RBP10.58□□□□□ -0.72
VMP1-207ENST00000588131 SUCOQ9UBS9 1254 aaKnown RBP10.58□□□□□ -0.72
VMP1-207ENST00000588131 EGFL7Q9UHF1 273 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 PCDHGA3Q9Y5H0 932 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 PCNX2A6NKB5 2137 aa10.58□□□□□ -0.72
VMP1-207ENST00000588131 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.57□□□□□ -0.72
VMP1-207ENST00000588131 FAM220BPB1ANY3 271 aa10.57□□□□□ -0.72
VMP1-207ENST00000588131 HRKO00198 91 aa10.57□□□□□ -0.72
VMP1-207ENST00000588131 UPK1AO00322 258 aa10.57□□□□□ -0.72
VMP1-207ENST00000588131 PLOD2O00469 737 aa10.57□□□□□ -0.72
VMP1-207ENST00000588131 ACOT8O14734 319 aa10.57□□□□□ -0.72
VMP1-207ENST00000588131 EMC8O43402 210 aa10.57□□□□□ -0.72
VMP1-207ENST00000588131 DNAJA2O60884 412 aa10.57□□□□□ -0.72
VMP1-207ENST00000588131 NME6O75414 186 aaPredicted RBP10.57□□□□□ -0.72
VMP1-207ENST00000588131 CIB2O75838 187 aa10.57□□□□□ -0.72
VMP1-207ENST00000588131 KRT75O95678 551 aa10.57□□□□□ -0.72
VMP1-207ENST00000588131 DLGAP3O95886 979 aa10.57□□□□□ -0.72
VMP1-207ENST00000588131 ETFAP13804 333 aa10.57□□□□□ -0.72
VMP1-207ENST00000588131 HTR1EP28566 365 aa10.57□□□□□ -0.72
VMP1-207ENST00000588131 PRKAG1P54619 331 aa10.57□□□□□ -0.72
VMP1-207ENST00000588131 ELF3P78545 371 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms