RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 ZNF780BQ9Y6R6 833 aa11.45□□□□□ -0.58
SS18-225ENST00000585121 A0A1B0GTH9 108 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 C2orf92A0A1B0GVN3 265 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 A0A1W2PPM1 405 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 G3V3Y1 287 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 COPEO14579 308 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 ERLIN1O75477 346 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 CRCPO75575 148 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 ERAL1O75616 437 aaKnown RBP11.44□□□□□ -0.58
SS18-225ENST00000585121 SHBGP04278 402 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 CPMP14384 443 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 DCTP40126 519 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 NRG3P56975 720 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 ACSM2AQ08AH3 577 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 GALNT1Q10472 559 aaPredicted RBP11.44□□□□□ -0.58
SS18-225ENST00000585121 CMPK2Q5EBM0 449 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 ACSM2BQ68CK6 577 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 ZNF787Q6DD87 383 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 SLC48A1Q6P1K1 146 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 ZYG11AQ6WRX3 759 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 FAM13CQ8NE31 585 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 OR7G1Q8NGA0 311 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 AGAP11Q8TF27 550 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 ITLN2Q8WWU7 325 aaPredicted RBP11.44□□□□□ -0.58
SS18-225ENST00000585121 UCN3Q969E3 161 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 TM4SF18Q96CE8 201 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 SPACA9Q96E40 222 aaPredicted RBP11.44□□□□□ -0.58
SS18-225ENST00000585121 HBEGFQ99075 208 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 DEFB127Q9H1M4 99 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 RUBCNLQ9H714 662 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 IL1RL2Q9HB29 575 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 DEPPQ9NTK1 212 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 MCM8Q9UJA3 840 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 MID2Q9UJV3 735 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 CFL2Q9Y281 166 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 MEMO1Q9Y316 297 aa11.44□□□□□ -0.58
SS18-225ENST00000585121 KLF2Q9Y5W3 355 aaPredicted RBP11.44□□□□□ -0.58
SS18-225ENST00000585121 GNG14A0A1W2PPG7 69 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 FAM166BA8MTA8 275 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 E9PLN8 166 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 H3BQF6 201 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 TP53I11O14683 189 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 CDH16O75309 829 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 PDE9AO76083 593 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 TPOP07202 933 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 CSNK2A2P19784 350 aaPredicted RBP11.43□□□□□ -0.58
SS18-225ENST00000585121 AGAP20933 346 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 CRHR1P34998 444 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 ALDH9A1P49189 494 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 RPP38P78345 283 aaKnown RBP11.43□□□□□ -0.58
SS18-225ENST00000585121 EBPQ15125 230 aaKnown RBP11.43□□□□□ -0.58
SS18-225ENST00000585121 ZNF791Q3KP31 576 aaPredicted RBP11.43□□□□□ -0.58
SS18-225ENST00000585121 SPIN4Q56A73 249 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 TCHHL1Q5QJ38 904 aaPredicted RBP11.43□□□□□ -0.58
SS18-225ENST00000585121 SP5Q6BEB4 398 aaPredicted RBP11.43□□□□□ -0.58
SS18-225ENST00000585121 DOLPP1Q86YN1 238 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 SAMD14Q8IZD0 417 aaPredicted RBP11.43□□□□□ -0.58
SS18-225ENST00000585121 OR52N2Q8NGI0 321 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 FAM57AQ8TBR7 257 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 RDH11Q8TC12 318 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 CHTF18Q8WVB6 975 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 TP53INP1Q96A56 240 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 KLHL29Q96CT2 875 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 VKORC1Q9BQB6 163 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 TTTY12Q9BZ98 90 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 OR10A5Q9H207 317 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 MID1IP1Q9NPA3 183 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 CHST11Q9NPF2 352 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 PFDN4Q9NQP4 134 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 CNIH4Q9P003 139 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 ENTPD4Q9Y227 616 aa11.43□□□□□ -0.58
SS18-225ENST00000585121 HNRNPRO43390 633 aaKnown RBP11.42□□□□□ -0.58
SS18-225ENST00000585121 PCDH7O60245 1069 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 ZNF354AO60765 605 aaPredicted RBP11.42□□□□□ -0.58
SS18-225ENST00000585121 NADKO95544 446 aaPredicted RBP11.42□□□□□ -0.58
SS18-225ENST00000585121 PROCP04070 461 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 FBXO45P0C2W1 286 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 CCL3P10147 92 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 DRD2P14416 443 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 SSTR4P31391 388 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 FEN1P39748 380 aaKnown RBP11.42□□□□□ -0.58
SS18-225ENST00000585121 TMED10P49755 219 aaKnown RBP11.42□□□□□ -0.58
SS18-225ENST00000585121 NR0B1P51843 470 aaKnown RBP11.42□□□□□ -0.58
SS18-225ENST00000585121 KCNJ2P63252 427 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 FUT7Q11130 342 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 IMPG1Q17R60 797 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 SPDYAQ5MJ70 313 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 TMEM211Q6ICI0 200 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 CD163Q86VB7 1156 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 FAM109AQ8N4B1 249 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 PAQR8Q8TEZ7 354 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 BRINP2Q9C0B6 783 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 IQCGQ9H095 443 aaKnown RBP11.42□□□□□ -0.58
SS18-225ENST00000585121 LDAHQ9H6V9 325 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 GIMAP4Q9NUV9 329 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 BCAP29Q9UHQ4 241 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 CES1P1Q9UKY3 287 aa11.42□□□□□ -0.58
SS18-225ENST00000585121 BOKQ9UMX3 212 aaPredicted RBP11.42□□□□□ -0.58
SS18-225ENST00000585121 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.42□□□□□ -0.58
SS18-225ENST00000585121 A0A0G2JMM0 328 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms