RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 SULF2Q8IWU5 870 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 TAGAPQ8N103 731 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 C16orf78Q8WTQ4 265 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 C11orf24Q96F05 449 aaPredicted RBP25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 GAL3ST4Q96RP7 486 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 SSU72Q9NP77 194 aaKnown RBP25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 OSGIN2Q9Y236 505 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 C2orf92A0A1B0GVN3 265 aa25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 TYROBPO43914 113 aa25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 PEX1O43933 1283 aa25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 FGF4P08620 206 aa25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 NEFHP12036 1026 aa25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 FEN1P39748 380 aaKnown RBP25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 MEOX1P50221 254 aa25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 ZNF763Q0D2J5 394 aa25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 CLEC6AQ6EIG7 209 aa25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 MDGA2Q7Z553 956 aa25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 LRRC25Q8N386 305 aaPredicted RBP25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 GPR137Q96N19 417 aa25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 BRINP2Q9C0B6 783 aa25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 WWTR1Q9GZV5 400 aa25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 CENPHQ9H3R5 247 aa25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 PFDN4Q9NQP4 134 aa25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 EHD3Q9NZN3 535 aa25.15■■□□□ 1.62
SMARCD2-210ENST00000584400 A0A1B0GUH1 482 aa25.14■■□□□ 1.62
SMARCD2-210ENST00000584400 SEMA7AO75326 666 aa25.14■■□□□ 1.62
SMARCD2-210ENST00000584400 MAP4K2Q12851 820 aa25.14■■□□□ 1.62
SMARCD2-210ENST00000584400 EBPQ15125 230 aaKnown RBP25.14■■□□□ 1.62
SMARCD2-210ENST00000584400 CLYBLQ8N0X4 340 aa25.14■■□□□ 1.62
SMARCD2-210ENST00000584400 VWA5B2Q8N398 1253 aa25.14■■□□□ 1.62
SMARCD2-210ENST00000584400 CPSF7Q8N684 471 aaKnown RBP25.14■■□□□ 1.62
SMARCD2-210ENST00000584400 DOK4Q8TEW6 326 aa25.14■■□□□ 1.62
SMARCD2-210ENST00000584400 TP53INP1Q96A56 240 aa25.14■■□□□ 1.62
SMARCD2-210ENST00000584400 MECRQ9BV79 373 aa25.14■■□□□ 1.62
SMARCD2-210ENST00000584400 EBPLQ9BY08 206 aa25.14■■□□□ 1.62
SMARCD2-210ENST00000584400 OR10A5Q9H207 317 aa25.14■■□□□ 1.62
SMARCD2-210ENST00000584400 ENTPD4Q9Y227 616 aa25.14■■□□□ 1.62
SMARCD2-210ENST00000584400 MYO18BQ8IUG5 2567 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 A0A1W2PS29 197 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 CAPN14A8MX76 684 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 NPIPB8E9PQR5 432 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 BPGMP07738 259 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 STSP08842 583 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 PRPH2P23942 346 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 SSTR4P31391 388 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 PER3P56645 1201 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 KCNK10P57789 538 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 SRSF11Q05519 484 aaKnown RBP25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 PRICKLE4Q2TBC4 344 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 C4orf17Q53FE4 359 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 ARL13AQ5H913 290 aaPredicted RBP25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 LRIG3Q6UXM1 1119 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 BNC2Q6ZN30 1099 aaPredicted RBP25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 MMP21Q8N119 569 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 ZIM3Q96PE6 472 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 STMN4Q9H169 189 aaPredicted RBP25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 TNFRSF12AQ9NP84 129 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 SACM1LQ9NTJ5 587 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 HEY2Q9UBP5 337 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 FIS1Q9Y3D6 152 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 ACTL7BQ9Y614 415 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 NBASA2RRP1 2371 aa25.13■■□□□ 1.61
SMARCD2-210ENST00000584400 NPIPA5E9PKD4 350 aa25.12■■□□□ 1.61
SMARCD2-210ENST00000584400 SEC22BO75396 215 aa25.12■■□□□ 1.61
SMARCD2-210ENST00000584400 P04436 131 aa25.12■■□□□ 1.61
SMARCD2-210ENST00000584400 CREB1P16220 341 aa25.12■■□□□ 1.61
SMARCD2-210ENST00000584400 ZNF750Q32MQ0 723 aa25.12■■□□□ 1.61
SMARCD2-210ENST00000584400 KANK2Q63ZY3 851 aa25.12■■□□□ 1.61
SMARCD2-210ENST00000584400 ZFP62Q8NB50 900 aaPredicted RBP25.12■■□□□ 1.61
SMARCD2-210ENST00000584400 CNRIP1Q96F85 164 aaPredicted RBP25.12■■□□□ 1.61
SMARCD2-210ENST00000584400 ZNF681Q96N22 645 aa25.12■■□□□ 1.61
SMARCD2-210ENST00000584400 MIEF1Q9NQG6 463 aa25.12■■□□□ 1.61
SMARCD2-210ENST00000584400 C1orf109Q9NX04 203 aa25.12■■□□□ 1.61
SMARCD2-210ENST00000584400 NPIPA1Q9UND3 350 aa25.12■■□□□ 1.61
SMARCD2-210ENST00000584400 TRAF6Q9Y4K3 522 aa25.12■■□□□ 1.61
SMARCD2-210ENST00000584400 TFECO14948 347 aaPredicted RBP25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 TM9SF1O15321 606 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 CLPSP04118 112 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 CT62P0C5K7 136 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 DDCP20711 480 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 CNR1P21554 472 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 MPIP34949 423 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 CASP6P55212 293 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 NRG3P56975 720 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 GPR85P60893 370 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 C2orf80Q0P641 193 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 NOXRED1Q6NXP6 359 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 RGS9BPQ6ZS82 235 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 GK5Q6ZS86 529 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 IKBIPQ70UQ0 350 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 EXOC3L1Q86VI1 746 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 NUDCD3Q8IVD9 361 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 ZNF615Q8N8J6 731 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 C17orf47Q8NEP4 570 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 C16orf52Q8NHV5 167 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 CDC26Q8NHZ8 85 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 PPP1R14CQ8TAE6 165 aa25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 EXOSC8Q96B26 276 aaKnown RBP25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 SPACA9Q96E40 222 aaPredicted RBP25.11■■□□□ 1.61
SMARCD2-210ENST00000584400 PGM2Q96G03 612 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms