RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 SLC6A17Q9H1V8 727 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 DCSTAMPQ9H295 470 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 NKX2-4Q9H2Z4 354 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TRIT1Q9H3H1 467 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 LIN7BQ9HAP6 207 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SLC28A3Q9HAS3 691 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RAD18Q9NS91 495 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 C14orf119Q9NWQ9 140 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 STMN3Q9NZ72 180 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PCDHB1Q9Y5F3 818 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SLC22A7Q9Y694 548 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 A0A0U1RQK1 487 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ZNF320A2RRD8 509 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 OR2AG2A6NM03 316 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SAP18O00422 153 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GABARAPO95166 117 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 IGSF6O95976 241 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 HPRP00739 348 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 FHP07954 510 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TGM1P22735 817 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CD40LGP29965 261 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SPAM1P38567 509 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RECQLP46063 649 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GBX2P52951 348 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 KLHL17Q6TDP4 642 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 UBE2R2Q712K3 238 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 FAM217AQ8IXS0 508 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PRSS58Q8IYP2 241 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 OR2AP1Q8NGE2 309 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 OR6Q1Q8NGQ2 317 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 DYNC2LI1Q8TCX1 351 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CAPSLQ8WWF8 208 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RFKQ969G6 155 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 QRFPRQ96P65 431 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ZNF300Q96RE9 604 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 OR51E2Q9H255 320 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 DSN1Q9H410 356 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 THG1LQ9NWX6 298 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GPR83Q9NYM4 423 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RHCGQ9UBD6 479 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SLC25A13Q9UJS0 675 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PCDHGB1Q9Y5G3 927 aa11.04□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ANTXRLA6NF34 631 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 NDUFS8O00217 210 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 WBP4O75554 376 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CLDN9O95484 217 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 LATS1O95835 1130 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 FCHO2Q0JRZ9 810 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SELENBP1Q13228 472 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 HIST2H2ACQ16777 129 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ATAD3BQ5T9A4 648 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PLEKHG7Q6ZR37 379 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 HIPK1Q86Z02 1210 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CA5BP1Q8WTZ4 195 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ZNF707Q96C28 371 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CCDC115Q96NT0 180 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 KCNS3Q9BQ31 491 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ZSCAN5AQ9BUG6 496 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SNTG1Q9NSN8 517 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 NUDT15Q9NV35 164 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 THUMPD1Q9NXG2 353 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SMIM30A4D0T7 59 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 J3KTA2 159 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GPX5O75715 221 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SNAPINO95295 136 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 STSP08842 583 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 C1SP09871 688 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 LAMP1P11279 417 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SERPINA4P29622 427 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 RRM2P31350 389 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SLC19A1P41440 591 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GSTM5P46439 218 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GZMMP51124 257 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SNRPD1P62314 119 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 IER5LQ5T953 404 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TMEM215Q68D42 235 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SYT12Q8IV01 421 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 MED8Q96G25 268 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SLIRPQ9GZT3 109 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SOHLH2Q9NX45 425 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TPRKBQ9Y3C4 175 aa11.03□□□□□ -0.64
CDK5RAP3-231ENST00000584063 TRBV5-4A0A0C4DH59 114 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 EVPLLA8MZ36 301 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 FAM227AF5H4B4 570 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SLC28A1O00337 649 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GFRA2O00451 464 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 SCAMP1O15126 338 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 AIREO43918 545 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 FABP3P05413 133 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 COX7A2P14406 83 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CD22P20273 847 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 POU1F1P28069 291 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 PTPN6P29350 595 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 MRPL19P49406 292 aaKnown RBP11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 CCR9P51686 369 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 GNG2P59768 71 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 AP1S1P61966 158 aa11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ALDH6A1Q02252 535 aaKnown RBP11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 ZNF267Q14586 743 aaPredicted RBP11.02□□□□□ -0.64
CDK5RAP3-231ENST00000584063 MAD2L1BPQ15013 274 aaPredicted RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms