RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 COX20Q5RI15 118 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.76□□□□□ -1.01
SS18-220ENST00000582092 SAXO2Q658L1 398 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 C18orf63Q68DL7 685 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 OR2T5Q6IEZ7 315 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 MRM1Q6IN84 353 aaKnown RBP8.76□□□□□ -1.01
SS18-220ENST00000582092 FRMPD2BQ6IN97 320 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 FAM92BQ6ZTR7 304 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 RNF44Q7L0R7 432 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 VN1R4Q7Z5H5 301 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 SPRED1Q7Z699 444 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 CYP4Z1Q86W10 505 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 PTOV1Q86YD1 416 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 PLXDC1Q8IUK5 500 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 OR4N4Q8N0Y3 316 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 LRRC25Q8N386 305 aaPredicted RBP8.76□□□□□ -1.01
SS18-220ENST00000582092 METTL25Q8N6Q8 603 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 AMER3Q8N944 861 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 TTC29Q8NA56 475 aaPredicted RBP8.76□□□□□ -1.01
SS18-220ENST00000582092 OR2T29Q8NH02 315 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 FLVCR1-AS1Q8TAF5 88 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 TANKQ92844 425 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 MAL2Q969L2 176 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 TGM7Q96PF1 710 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 TRAPPC9Q96Q05 1148 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 SLC29A1Q99808 456 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 RBM4BQ9BQ04 359 aaKnown RBP8.76□□□□□ -1.01
SS18-220ENST00000582092 RBM4Q9BWF3 364 aaKnown RBP8.76□□□□□ -1.01
SS18-220ENST00000582092 OSBPL10Q9BXB5 764 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 NPLQ9BXD5 320 aaPredicted RBP8.76□□□□□ -1.01
SS18-220ENST00000582092 PDE7BQ9NP56 450 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 SMPD3Q9NY59 655 aaPredicted RBP8.76□□□□□ -1.01
SS18-220ENST00000582092 CALML5Q9NZT1 146 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 KIF17Q9P2E2 1029 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 LRIT1Q9P2V4 623 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 P2RX2Q9UBL9 471 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 PILRAQ9UKJ1 303 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 PLCL2Q9UPR0 1127 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 ZNF451Q9Y4E5 1061 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 SLC22A7Q9Y694 548 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 AK5Q9Y6K8 562 aa8.76□□□□□ -1.01
SS18-220ENST00000582092 TLCD2A6NGC4 264 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 DUXAA6NLW8 204 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 EIF4E1BA6NMX2 242 aaKnown RBP8.75□□□□□ -1.01
SS18-220ENST00000582092 hCG_2039718K7EN88 272 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 M0QX08 132 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 EI24O14681 340 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 ADAMDEC1O15204 470 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 DUX1O43812 170 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 HS6ST1O60243 411 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 TNFRSF21O75509 655 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 RFPL3O75679 317 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 PIAS2O75928 621 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 TNFAIP8O95379 198 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 AGR2O95994 175 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 BCHEP06276 602 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 LYNP07948 512 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 NUDT7P0C024 238 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 ST6GAL1P15907 406 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 PORP16435 677 aaPredicted RBP8.75□□□□□ -1.01
SS18-220ENST00000582092 FRKP42685 505 aaPredicted RBP8.75□□□□□ -1.01
SS18-220ENST00000582092 AVPR1BP47901 424 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 CDK9P50750 372 aaKnown RBP8.75□□□□□ -1.01
SS18-220ENST00000582092 ALDH3A2P51648 485 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 CLCN2P51788 898 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 LIM2P55344 173 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 HPCAP84074 193 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 MERTKQ12866 999 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 BLMHQ13867 455 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 DAG1Q14118 895 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 ADRM1Q16186 407 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 PRSS53Q2L4Q9 553 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 GPAT3Q53EU6 434 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 TTC23Q5W5X9 447 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 TMEM214Q6NUQ4 689 aaKnown RBP8.75□□□□□ -1.01
SS18-220ENST00000582092 OGFOD3Q6PK18 319 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 UNQ6494/PRO21346Q6UXR6 183 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 TMEM64Q6YI46 380 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 TMPRSS12Q86WS5 348 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 ARMC8Q8IUR7 673 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 APLFQ8IW19 511 aaPredicted RBP8.75□□□□□ -1.01
SS18-220ENST00000582092 SFTPA2Q8IWL1 248 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 MARVELD2Q8N4S9 558 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 NUP43Q8NFH3 380 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 OR10Q1Q8NGQ4 319 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 FAM110BQ8TC76 370 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 ADAMTS18Q8TE60 1221 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 GEMIN6Q8WXD5 167 aaKnown RBP8.75□□□□□ -1.01
SS18-220ENST00000582092 CD180Q99467 661 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 MAP3K3Q99759 626 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 OR51I1Q9H343 314 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 A4GALTQ9NPC4 353 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 IL1RAPQ9NPH3 570 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 PRDM9Q9NQV7 894 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 EXD2Q9NVH0 621 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 DDX18Q9NVP1 670 aaKnown RBP8.75□□□□□ -1.01
SS18-220ENST00000582092 NLGN3Q9NZ94 848 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 DAPP1Q9UN19 280 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 NAALAD2Q9Y3Q0 740 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 SAMHD1Q9Y3Z3 626 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms