RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 POLR3HQ9Y535 204 aaPredicted RBP9.23□□□□□ -0.93
GGA3-209ENST00000580646 FLNCQ14315 2725 aa9.23□□□□□ -0.93
GGA3-209ENST00000580646 SPENQ96T58 3664 aaKnown RBP9.23□□□□□ -0.93
GGA3-209ENST00000580646 ATP6AP2A0A1C7CYW4 349 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 OR2W5A6NFC9 320 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 PGRMC2O15173 223 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 ATP6AP2O75787 350 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 SLITRK5O94991 958 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 ATP1B1P05026 303 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 SERPINA7P05543 415 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 IFI6P09912 130 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 BCKDHAP12694 445 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 COX7A2P14406 83 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 LBPP18428 481 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 CSNK2A2P19784 350 aaPredicted RBP9.22□□□□□ -0.93
GGA3-209ENST00000580646 MDH1P40925 334 aaKnown RBP9.22□□□□□ -0.93
GGA3-209ENST00000580646 UQCRFS1P47985 274 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 SLC26A5P58743 744 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 ACTN3Q08043 901 aaPredicted RBP9.22□□□□□ -0.93
GGA3-209ENST00000580646 C2orf80Q0P641 193 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 PDE7AQ13946 482 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 CRB2Q5IJ48 1285 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 EPGNQ6UW88 154 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 ISLR2Q6UXK2 745 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 LINC00696Q6ZRV3 163 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 R3HCC1LQ7Z5L2 792 aaKnown RBP9.22□□□□□ -0.93
GGA3-209ENST00000580646 SPATA19Q7Z5L4 167 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 FAM26EQ8N5C1 309 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 NATD1Q8N6N6 113 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 MORN4Q8NDC4 146 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 NFAM1Q8NET5 270 aaPredicted RBP9.22□□□□□ -0.93
GGA3-209ENST00000580646 CEP70Q8NHQ1 597 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 ACTRT2Q8TDY3 377 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 PSMF1Q92530 271 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 RBM18Q96H35 190 aaKnown RBP9.22□□□□□ -0.93
GGA3-209ENST00000580646 ART5Q96L15 291 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 ZNF681Q96N22 645 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 DGAT2Q96PD7 388 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 LMF1Q96S06 567 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 EPS8L2Q9H6S3 715 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 ASF1BQ9NVP2 202 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 MARCOQ9UEW3 520 aaPredicted RBP9.22□□□□□ -0.93
GGA3-209ENST00000580646 CSAG2Q9Y5P2 127 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 USH1CQ9Y6N9 552 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 ZNF780BQ9Y6R6 833 aa9.22□□□□□ -0.93
GGA3-209ENST00000580646 EXPH5Q8NEV8 1989 aa9.21□□□□□ -0.93
GGA3-209ENST00000580646 NUP214P35658 2090 aaPredicted RBP9.21□□□□□ -0.93
GGA3-209ENST00000580646 TCP11X1B4DZS4 312 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 DYRK3O43781 588 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 PRKRAO75569 313 aaKnown RBP9.21□□□□□ -0.94
GGA3-209ENST00000580646 SEC24DO94855 1032 aaPredicted RBP9.21□□□□□ -0.94
GGA3-209ENST00000580646 KITP10721 976 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 CPMP14384 443 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 PORP16435 677 aaPredicted RBP9.21□□□□□ -0.94
GGA3-209ENST00000580646 PRPS1L1P21108 318 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 TACR1P25103 407 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 MRPL19P49406 292 aaKnown RBP9.21□□□□□ -0.94
GGA3-209ENST00000580646 GPR143P51810 404 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 XKP51811 444 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 MFAP5Q13361 173 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 IL23RQ5VWK5 629 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 H3F3CQ6NXT2 135 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 MAVSQ7Z434 540 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 CAMKMTQ7Z624 323 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 LGI4Q8N135 537 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 ARMC10Q8N2F6 343 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 LIX1Q8N485 282 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 APCDD1LQ8NCL9 501 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 B3GNT7Q8NFL0 401 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 OR8K3Q8NH51 312 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 ELP5Q8TE02 316 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 PTPMT1Q8WUK0 201 aaPredicted RBP9.21□□□□□ -0.94
GGA3-209ENST00000580646 KLHL29Q96CT2 875 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 ERP27Q96DN0 273 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 CNRIP1Q96F85 164 aaPredicted RBP9.21□□□□□ -0.94
GGA3-209ENST00000580646 VMP1Q96GC9 406 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 FBXL20Q96IG2 436 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 EGLN2Q96KS0 407 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 CCDC28BQ9BUN5 200 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 REEP4Q9H6H4 257 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 MIEF1Q9NQG6 463 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 SLC35C2Q9NQQ7 365 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 BATF3Q9NR55 127 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 GIMAP4Q9NUV9 329 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.21□□□□□ -0.94
GGA3-209ENST00000580646 PTGFRNQ9P2B2 879 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 ATP6V1HQ9UI12 483 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 UTS2RQ9UKP6 389 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 EXO1Q9UQ84 846 aaKnown RBP9.21□□□□□ -0.94
GGA3-209ENST00000580646 PCDHGA10Q9Y5H3 936 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 COPG1Q9Y678 874 aaKnown RBP9.21□□□□□ -0.94
GGA3-209ENST00000580646 CLCA3PQ9Y6N3 262 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 RELNP78509 3460 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 DOPEY2Q9Y3R5 2298 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 CNTRLQ7Z7A1 2325 aa9.21□□□□□ -0.94
GGA3-209ENST00000580646 LRRK2Q5S007 2527 aa9.2□□□□□ -0.94
GGA3-209ENST00000580646 IGHV3-20A0A0C4DH32 117 aa9.2□□□□□ -0.94
GGA3-209ENST00000580646 GLOD5A6NK44 160 aa9.2□□□□□ -0.94
GGA3-209ENST00000580646 MYO1GB0I1T2 1018 aa9.2□□□□□ -0.94
GGA3-209ENST00000580646 C17orf105B2RV13 164 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms