RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 PANX1Q96RD7 426 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 CCDC106Q9BWC9 280 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 RYDENQ9NUL5 291 aaKnown RBP13.35□□□□□ -0.27
SKA2-205ENST00000580541 P4HTMQ9NXG6 502 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 ARMCX1Q9P291 453 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 VPS4AQ9UN37 437 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 POLHQ9Y253 713 aa13.35□□□□□ -0.27
SKA2-205ENST00000580541 NUP214P35658 2090 aaPredicted RBP13.35□□□□□ -0.27
SKA2-205ENST00000580541 IGHV1-45A0A0A0MS14 117 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 LOC100653049A0A140TA62 436 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 CDC14CA4D256 554 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 A8MUA0 341 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 SOCS6O14544 535 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 PLOD3O60568 738 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 ERN1O75460 977 aaKnown RBP13.34□□□□□ -0.27
SKA2-205ENST00000580541 KRT34O76011 436 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 KCNH1O95259 989 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 CPSF4O95639 269 aaKnown RBP13.34□□□□□ -0.27
SKA2-205ENST00000580541 PGDP52209 483 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 HSPB3Q12988 150 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 PRICKLE4Q2TBC4 344 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 SPDYE7PQ495Y7 208 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 TIGD2Q4W5G0 525 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 C6orf10Q5SRN2 563 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 IRAK1BP1Q5VVH5 260 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 FAM91A1Q658Y4 838 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 LANCL3Q6ZV70 420 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 TRPM8Q7Z2W7 1104 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 PPP1R32Q7Z5V6 425 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 MRGPREQ86SM8 312 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 SPACA3Q8IXA5 215 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 SHISA5Q8N114 240 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 CLEC1AQ8NC01 280 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 B3GNT7Q8NFL0 401 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 PSMA8Q8TAA3 256 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 M1APQ8TC57 530 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 PTPMT1Q8WUK0 201 aaPredicted RBP13.34□□□□□ -0.27
SKA2-205ENST00000580541 VPS33AQ96AX1 596 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 ELP4Q96EB1 424 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 SENP5Q96HI0 755 aaPredicted RBP13.34□□□□□ -0.27
SKA2-205ENST00000580541 FBXL20Q96IG2 436 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 DCBLD2Q96PD2 775 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 CNPPD1Q9BV87 410 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 TMEM121BQ9BXQ6 578 aaPredicted RBP13.34□□□□□ -0.27
SKA2-205ENST00000580541 EFCAB1Q9HAE3 211 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 ATP13A2Q9NQ11 1180 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 GID8Q9NWU2 228 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 PRODH2Q9UF12 536 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 CLDN16Q9Y5I7 305 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 SNX8Q9Y5X2 465 aa13.34□□□□□ -0.27
SKA2-205ENST00000580541 MRPS18BQ9Y676 258 aaKnown RBP13.34□□□□□ -0.27
SKA2-205ENST00000580541 MYOCOSA0A1B0GUC4 107 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 TTC36A6NLP5 189 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 OR6C76A6NM76 312 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 C1QTNF9BB2RNN3 333 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 TGFBR3LH3BV60 316 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 EMC8O43402 210 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 COQ9O75208 318 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 C6orf47O95873 294 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 CAPNS1P04632 268 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 C1QTNF9P0C862 333 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 COX4I1P13073 169 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 UQCRC2P22695 453 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 CCT3P49368 545 aaKnown RBP13.33□□□□□ -0.28
SKA2-205ENST00000580541 CLCN2P51788 898 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 WNT3P56703 355 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 EEF1A2Q05639 463 aaKnown RBP13.33□□□□□ -0.28
SKA2-205ENST00000580541 FUT7Q11130 342 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 AIMP2Q13155 320 aaKnown RBP13.33□□□□□ -0.28
SKA2-205ENST00000580541 ART3Q13508 389 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 TP53BP2Q13625 1128 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 IL10RAQ13651 578 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 KRT72Q14CN4 511 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 MPEG1Q2M385 716 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 ZNF750Q32MQ0 723 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 PLAG1Q6DJT9 500 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 FAM180BQ6P0A1 224 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 TMEM64Q6YI46 380 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 ZNF621Q6ZSS3 439 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 ZNF551Q7Z340 670 aaPredicted RBP13.33□□□□□ -0.28
SKA2-205ENST00000580541 PROSER1Q86XN7 944 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 ADCY4Q8NFM4 1077 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 OR56A1Q8NGH5 318 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 OR5L2Q8NGL0 311 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 OR1N1Q8NGS0 311 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 OR9A2Q8NGT5 310 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 GOT1L1Q8NHS2 421 aaPredicted RBP13.33□□□□□ -0.28
SKA2-205ENST00000580541 SUN3Q8TAQ9 357 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 ADAMTS17Q8TE56 1095 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 ZCCHC14Q8WYQ9 949 aaKnown RBP13.33□□□□□ -0.28
SKA2-205ENST00000580541 C8orf44Q96CB5 159 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 CTHRC1Q96CG8 243 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 VMP1Q96GC9 406 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 OR8D2Q9GZM6 311 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 DDX18Q9NVP1 670 aaKnown RBP13.33□□□□□ -0.28
SKA2-205ENST00000580541 BCAP29Q9UHQ4 241 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 FBXL4Q9UKA2 621 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 PPIEQ9UNP9 301 aaKnown RBP13.33□□□□□ -0.28
SKA2-205ENST00000580541 WDFY3Q8IZQ1 3526 aa13.33□□□□□ -0.28
SKA2-205ENST00000580541 APC2O95996 2303 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms