RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 URI1O94763 535 aaPredicted RBP12.63□□□□□ -0.39
GGA3-208ENST00000579743 ZWINTO95229 277 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 SIX3O95343 332 aaPredicted RBP12.63□□□□□ -0.39
GGA3-208ENST00000579743 AIFM1O95831 613 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 OTCP00480 354 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 ALDOAP04075 364 aaKnown RBP12.63□□□□□ -0.39
GGA3-208ENST00000579743 GDF1P27539 372 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 MASP1P48740 699 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 NEK2P51955 445 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 MAPK12P53778 367 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 EBPQ15125 230 aaKnown RBP12.63□□□□□ -0.39
GGA3-208ENST00000579743 TRADDQ15628 312 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 HSPB2Q16082 182 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 NTRK2Q16620 822 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 WHAMMP3Q1A5X7 153 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 TECRLQ5HYJ1 363 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 TMEM200AQ86VY9 491 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 RELL1Q8IUW5 271 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 DMRTC2Q8IXT2 367 aaPredicted RBP12.63□□□□□ -0.39
GGA3-208ENST00000579743 PM20D2Q8IYS1 436 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 CNPY4Q8N129 248 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 ACBD4Q8NC06 268 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 OR7G1Q8NGA0 311 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 WDR20Q8TBZ3 569 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 TRPC4APQ8TEL6 797 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 SECISBP2Q96T21 854 aaKnown RBP12.63□□□□□ -0.39
GGA3-208ENST00000579743 UCK2Q9BZX2 261 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 CXorf21Q9HAI6 301 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 ZDHHC18Q9NUE0 388 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 NINJ2Q9NZG7 142 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 SNX6Q9UNH7 406 aa12.63□□□□□ -0.39
GGA3-208ENST00000579743 ZNF407Q9C0G0 2248 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 TMPRSS11DO60235 418 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 NADKO95544 446 aaPredicted RBP12.62□□□□□ -0.39
GGA3-208ENST00000579743 ACSL3O95573 720 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 KLK1P06870 262 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 GLI4P10075 376 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 PORP16435 677 aaPredicted RBP12.62□□□□□ -0.39
GGA3-208ENST00000579743 TAC1P20366 129 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 NT5EP21589 574 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 XKP51811 444 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 NR0B1P51843 470 aaKnown RBP12.62□□□□□ -0.39
GGA3-208ENST00000579743 RPS6KA2Q15349 733 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 LRRC25Q8N386 305 aaPredicted RBP12.62□□□□□ -0.39
GGA3-208ENST00000579743 OR10G3Q8NGC4 313 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 NEIL3Q8TAT5 605 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 SLC44A1Q8WWI5 657 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 GPR78Q96P69 363 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 FMO2Q99518 471 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 MRPL57Q9BQC6 102 aaKnown RBP12.62□□□□□ -0.39
GGA3-208ENST00000579743 FAIM2Q9BWQ8 316 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 ZNF703Q9H7S9 590 aaPredicted RBP12.62□□□□□ -0.39
GGA3-208ENST00000579743 SH2D2AQ9NP31 389 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 NFU1Q9UMS0 254 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 NPFFR2Q9Y5X5 522 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 LIPGQ9Y5X9 500 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 CHCHD2Q9Y6H1 151 aaPredicted RBP12.62□□□□□ -0.39
GGA3-208ENST00000579743 DNAJC13O75165 2243 aa12.62□□□□□ -0.39
GGA3-208ENST00000579743 PHF3Q92576 2039 aaKnown RBP12.61□□□□□ -0.39
GGA3-208ENST00000579743 C15orf38-AP3S2A0A0A6YYH1 394 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 C1orf226A1L170 272 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 HMX2A2RU54 273 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 LRRC14BA6NHZ5 514 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 AHRRA9YTQ3 701 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 POC1B-GALNT4F8VUJ3 575 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 HRKO00198 91 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 DVL2O14641 736 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 ZNF354AO60765 605 aaPredicted RBP12.61□□□□□ -0.39
GGA3-208ENST00000579743 PRKRAO75569 313 aaKnown RBP12.61□□□□□ -0.39
GGA3-208ENST00000579743 TRAPPC6AO75865 159 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 GBAP04062 536 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 CELA3AP09093 270 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 CPMP14384 443 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 TOMM20Q15388 145 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 GGTA1PQ4G0N0 100 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 GLE1Q53GS7 698 aaKnown RBP12.61□□□□□ -0.39
GGA3-208ENST00000579743 SGO1Q5FBB7 561 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 RIPPLY2Q5TAB7 128 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 DGAT2L6Q6ZPD8 337 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 WDR53Q7Z5U6 358 aaPredicted RBP12.61□□□□□ -0.39
GGA3-208ENST00000579743 RPRMLQ8N4K4 120 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 C17orf47Q8NEP4 570 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 SELENOMQ8WWX9 145 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 IFT81Q8WYA0 676 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 CDK15Q96Q40 435 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 PAFAH2Q99487 392 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 ZNF717Q9BY31 904 aaPredicted RBP12.61□□□□□ -0.39
GGA3-208ENST00000579743 OR10A5Q9H207 317 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 MRPL46Q9H2W6 279 aaKnown RBP12.61□□□□□ -0.39
GGA3-208ENST00000579743 SEMA4BQ9NPR2 832 aaPredicted RBP12.61□□□□□ -0.39
GGA3-208ENST00000579743 XPR1Q9UBH6 696 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 ZNF180Q9UJW8 692 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 PCTPQ9UKL6 214 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 SLC12A4Q9UP95 1085 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 ZNF780BQ9Y6R6 833 aa12.61□□□□□ -0.39
GGA3-208ENST00000579743 A0A087WUV0 522 aaPredicted RBP12.6□□□□□ -0.39
GGA3-208ENST00000579743 CCDC151A5D8V7 595 aa12.6□□□□□ -0.39
GGA3-208ENST00000579743 OR7A17O14581 309 aa12.6□□□□□ -0.39
GGA3-208ENST00000579743 PGRMC2O15173 223 aa12.6□□□□□ -0.39
GGA3-208ENST00000579743 CD1EP15812 388 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms