RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 TYSND1Q2T9J0 566 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 GPR33Q49SQ1 333 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 ATP13A5Q4VNC0 1218 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 NKAIN2Q5VXU1 208 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 TMEM53Q6P2H8 277 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 CCBE1Q6UXH8 406 aaPredicted RBP4.59□□□□□ -1.67
KARSP3-201ENST00000571212 CEACAM20Q6UY09 585 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 CERS6Q6ZMG9 384 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 KDELC2Q7Z4H8 507 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 GLT6D1Q7Z4J2 308 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 ZNF554Q86TJ5 538 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 EXOC3L1Q86VI1 746 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 HEATR4Q86WZ0 1026 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 IFT20Q8IY31 132 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 NAGSQ8N159 534 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 PDIK1LQ8N165 341 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 SLC25A41Q8N5S1 370 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 OR13C4Q8NGS5 318 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 CFAP61Q8NHU2 1237 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 PDCD6IPQ8WUM4 868 aaKnown RBP4.59□□□□□ -1.67
KARSP3-201ENST00000571212 NCSTNQ92542 709 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 NUS1Q96E22 293 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 VPS50Q96JG6 964 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 APOL2Q9BQE5 337 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 FAM83DQ9H4H8 585 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 SAP30LQ9HAJ7 183 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 VCX3AQ9NNX9 186 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 HEYLQ9NQ87 328 aaPredicted RBP4.59□□□□□ -1.67
KARSP3-201ENST00000571212 FBXO8Q9NRD0 319 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 OCIAD1Q9NX40 245 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 IL20Q9NYY1 176 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 PKD2L2Q9NZM6 624 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 SLC2A6Q9UGQ3 507 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 ANAPC5Q9UJX4 755 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 SLC17A4Q9Y2C5 497 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 NOSIPQ9Y314 301 aaKnown RBP4.59□□□□□ -1.67
KARSP3-201ENST00000571212 TMEM184BQ9Y519 407 aaPredicted RBP4.59□□□□□ -1.67
KARSP3-201ENST00000571212 SIRT4Q9Y6E7 314 aaPredicted RBP4.59□□□□□ -1.67
KARSP3-201ENST00000571212 HIVEP3Q5T1R4 2406 aa4.59□□□□□ -1.67
KARSP3-201ENST00000571212 ZNF106Q9H2Y7 1883 aaKnown RBP4.59□□□□□ -1.67
KARSP3-201ENST00000571212 TNRC6AQ8NDV7 1962 aaKnown RBP4.58□□□□□ -1.68
KARSP3-201ENST00000571212 LOC101059948A0A1B0GTJ6 334 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 CLCA1A8K7I4 914 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 F5H423 210 aaPredicted RBP4.58□□□□□ -1.68
KARSP3-201ENST00000571212 STX7O15400 261 aaKnown RBP4.58□□□□□ -1.68
KARSP3-201ENST00000571212 FAM155BO75949 473 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 WISP3O95389 354 aaPredicted RBP4.58□□□□□ -1.68
KARSP3-201ENST00000571212 CRYABP02511 175 aaKnown RBP4.58□□□□□ -1.68
KARSP3-201ENST00000571212 ABHD2P08910 425 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 PRKAR1AP10644 381 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 PGAM1P18669 254 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 TCN2P20062 427 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 OGNP20774 298 aaKnown RBP4.58□□□□□ -1.68
KARSP3-201ENST00000571212 GABRB3P28472 473 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 SPAM1P38567 509 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 MDH1P40925 334 aaKnown RBP4.58□□□□□ -1.68
KARSP3-201ENST00000571212 ELK3P41970 407 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 ACTR1BP42025 376 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 GNPDA1P46926 289 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 PLTPP55058 493 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 ARL4CP56559 192 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 ACTR1AP61163 376 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 CRADDP78560 199 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 TXNL4AP83876 142 aaKnown RBP4.58□□□□□ -1.68
KARSP3-201ENST00000571212 CDK3Q00526 305 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 COX10Q12887 443 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 CALCOCO2Q13137 446 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 ITGA9Q13797 1035 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 TWIST1Q15672 202 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 CHRNA6Q15825 494 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 DEFB109BQ30KR1 87 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 SPANXN3Q5MJ09 141 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 WDR74Q6RFH5 385 aaPredicted RBP4.58□□□□□ -1.68
KARSP3-201ENST00000571212 COLCA1Q6ZS62 124 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 C3orf62Q6ZUJ4 267 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 CENPUQ71F23 418 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 TIPARPQ7Z3E1 657 aaKnown RBP4.58□□□□□ -1.68
KARSP3-201ENST00000571212 SNX20Q7Z614 316 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 RASGRP3Q8IV61 690 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 P3H2Q8IVL5 708 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 ZNF547Q8IVP9 402 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 PIANPQ8IYJ0 282 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 MREGQ8N565 214 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 DNAAF3Q8N9W5 541 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 OR4L1Q8NH43 312 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 OR10G6Q8NH81 332 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 SUN5Q8TC36 379 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 BLOC1S5Q8TDH9 187 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 PATE1Q8WXA2 126 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 IFT81Q8WYA0 676 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 STARD8Q92502 1023 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 GLYATL1Q969I3 302 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 AP2M1Q96CW1 435 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 TRMT61AQ96FX7 289 aaKnown RBP4.58□□□□□ -1.68
KARSP3-201ENST00000571212 DNAJC1Q96KC8 554 aaKnown RBP4.58□□□□□ -1.68
KARSP3-201ENST00000571212 ZNF570Q96NI8 536 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 NDNQ99608 321 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 GPR63Q9BZJ6 419 aa4.58□□□□□ -1.68
KARSP3-201ENST00000571212 TWSG1Q9GZX9 223 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms