RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 TEX10Q9NXF1 929 aaPredicted RBP10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 C6orf203Q9P0P8 240 aaPredicted RBP10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 FETUBQ9UGM5 382 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 PHF11Q9UIL8 331 aa10.77□□□□□ -0.69
GTF3C1-209ENST00000568569 SONP18583 2426 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 C2orf92A0A1B0GVN3 265 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 FAM95CA0A1B0GW59 222 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 A8MXE2 369 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 TAPBPO15533 448 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 CTIFO43310 598 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 CDH16O75309 829 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 RCBTB2O95199 551 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 CPN1P15169 458 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 TLX1P31314 330 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 CPOXP36551 454 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 SLCO1A2P46721 670 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 HSPA7P48741 367 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 NAGLUP54802 743 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 DIO3P55073 304 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 TAS2R39P59534 338 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 EEF1A1P68104 462 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 TNFRSF17Q02223 184 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 IRF8Q02556 426 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 SLAMF1Q13291 335 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 ACKR1Q16570 336 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 WIPI1Q5MNZ9 446 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 EEF1A1P5Q5VTE0 462 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 SCIMPQ6UWF3 145 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 TMEM64Q6YI46 380 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 ZNF662Q6ZS27 426 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 ZC3HC1Q86WB0 502 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 FAM83FQ8NEG4 500 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 DOK4Q8TEW6 326 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 GRK7Q8WTQ7 553 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 ZNF473Q8WTR7 871 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 ANKRD49Q8WVL7 239 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 SLC44A1Q8WWI5 657 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 RIT1Q92963 219 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 UBE2E3Q969T4 207 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 TP53INP1Q96A56 240 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 CFAP36Q96G28 342 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 TMEM41AQ96HV5 264 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 UBTD1Q9HAC8 227 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 ZNF226Q9NYT6 803 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 PACSIN3Q9UKS6 424 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 NINQ8N4C6 2090 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 NCKAP5O14513 1909 aa10.76□□□□□ -0.69
GTF3C1-209ENST00000568569 MXRA5Q9NR99 2828 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 DEFB108AA8MXU0 73 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 H0Y3Z8 333 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 SAP18O00422 153 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 SH3BGRLO75368 114 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 STK16O75716 305 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 TGFB1P01137 390 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 SERPINB1P30740 379 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 SOX18P35713 384 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 BUD31P41223 144 aaPredicted RBP10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 CASP3P42574 277 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 FNTAP49354 379 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 NRG3P56975 720 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 PCDH1Q08174 1060 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 CBLBQ13191 982 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 CHIT1Q13231 466 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 GAB1Q13480 694 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 PPP1R7Q15435 360 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 TBCCQ15814 346 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 FBXO48Q5FWF7 155 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 CDKL4Q5MAI5 379 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 KHDRBS2Q5VWX1 349 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 HLA-DQA1Q5Y7H0 255 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 C18orf63Q68DL7 685 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 TIGD3Q6B0B8 471 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 OR4C11Q6IEV9 310 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 SULT1C3Q6IMI6 304 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 MED27Q6P2C8 311 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 C20orf204Q6ZNR8 217 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 YRDCQ86U90 279 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 GPR180Q86V85 440 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 GPSM1Q86YR5 675 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 GCNT2Q8N0V5 402 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 ZNF441Q8N8Z8 693 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 SPC24Q8NBT2 197 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 WNT2BQ93097 391 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 UCN3Q969E3 161 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 INTS12Q96CB8 462 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 CMTM7Q96FZ5 175 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 MS4A14Q96JA4 679 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 UCN2Q96RP3 112 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 NAP1L3Q99457 506 aaPredicted RBP10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 TUBA1CQ9BQE3 449 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 CENPKQ9BS16 269 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 GSX2Q9BZM3 304 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 DERL2Q9GZP9 239 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 POPDC3Q9HBV1 291 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 NPFFR2Q9Y5X5 522 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 PSAT1Q9Y617 370 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 KIAA1549Q9HCM3 1950 aa10.75□□□□□ -0.69
GTF3C1-209ENST00000568569 DNALI1O14645 258 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 GNB5O14775 395 aa10.74□□□□□ -0.69
GTF3C1-209ENST00000568569 MSTNO14793 375 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms