RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 HSD3B1P14060 373 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 CNR1P21554 472 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 ATP5F1P24539 256 aaPredicted RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 HSD3B2P26439 372 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 HTR1EP28566 365 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 PTGS2P35354 604 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 PTGER4P35408 488 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 HSD17B3P37058 310 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 KRT6CP48668 564 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 MAPK12P53778 367 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 CDH13P55290 713 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 SLC37A1P57057 533 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 PPIAP62937 165 aaKnown RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 ERVK-8P63133 956 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 HSF1Q00613 529 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 PLGLB1Q02325 96 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 CLCQ05315 142 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 ASPHQ12797 758 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 CSTF3Q12996 717 aaKnown RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 SLC29A2Q14542 456 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 ZNF267Q14586 743 aaPredicted RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 EBPQ15125 230 aaKnown RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 RASA2Q15283 850 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 ZNF630Q2M218 657 aaPredicted RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 HYAL4Q2M3T9 481 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 ZNF750Q32MQ0 723 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 ZNF791Q3KP31 576 aaPredicted RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 SGO1Q5FBB7 561 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 ZNF678Q5SXM1 525 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 TEX35Q5T0J7 233 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 CCNYL2Q5T2Q4 361 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 NDUFAF5Q5TEU4 345 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 C6orf163Q5TEZ5 329 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 SLC22A10Q63ZE4 541 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 SP5Q6BEB4 398 aaPredicted RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 FAM47EQ6ZV65 393 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 RPS27LQ71UM5 84 aaKnown RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 COMMD6Q7Z4G1 85 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 FGD2Q7Z6J4 655 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 CD163Q86VB7 1156 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 DOLPP1Q86YN1 238 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 TICAM1Q8IUC6 712 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 SLC22A9Q8IVM8 553 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 TAGAPQ8N103 731 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 OR4K14Q8NGD5 310 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 OR52N2Q8NGI0 321 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 FAM57AQ8TBR7 257 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 PAQR8Q8TEZ7 354 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 SELENOMQ8WWX9 145 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 SPACA9Q96E40 222 aaPredicted RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 TMEM237Q96Q45 408 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 GAL3ST4Q96RP7 486 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 DMRTA2Q96SC8 542 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 ZNF382Q96SR6 550 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 RHOXF2Q9BQY4 288 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 MRPL1Q9BYD6 325 aaKnown RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 TTTY12Q9BZ98 90 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 TXLNGYQ9BZA5 131 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 WWTR1Q9GZV5 400 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 TP63Q9H3D4 680 aaPredicted RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 PPCSQ9HAB8 311 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 CXorf21Q9HAI6 301 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 IL1RL2Q9HB29 575 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 SH2D2AQ9NP31 389 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 FARSBQ9NSD9 589 aaKnown RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 DEPPQ9NTK1 212 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 TEX10Q9NXF1 929 aaPredicted RBP4.42□□□□□ -1.7
CLK3-219ENST00000567805 TMEM216Q9P0N5 145 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 VPS29Q9UBQ0 182 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 DCDC2Q9UHG0 476 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 ZNF225Q9UK10 706 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 SLC12A4Q9UP95 1085 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 ERVK-19Q9WJR5 959 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 STK38LQ9Y2H1 464 aa4.42□□□□□ -1.7
CLK3-219ENST00000567805 PCNX1Q96RV3 2341 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 A0A0G2JMM0 328 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 A0A1B0GVC2 190 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 C2orf92A0A1B0GVN3 265 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 A0A1W2PPB8 328 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 A0A1W2PRS3 328 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 CCDC151A5D8V7 595 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 WASHC1A8K0Z3 465 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 FAM166BA8MTA8 275 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 KIR3DP1A8MWS1 328 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 G3V3Y1 287 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 PPP6CO00743 305 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 ADAM10O14672 748 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 BCKDKO14874 412 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 ZNHIT1O43257 154 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 SUSD5O60279 629 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 DLX3O60479 287 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 GLRA3O75311 464 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 ULK1O75385 1050 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 PDE9AO76083 593 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 OR4F21O95013 312 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 CLDN14O95500 239 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 IGHG3P01860 377 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 CLPSP04118 112 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 ATP1B1P05026 303 aa4.41□□□□□ -1.7
CLK3-219ENST00000567805 ENO1P06733 434 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms