RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 HSD3B2P26439 372 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 SERPINB3P29508 390 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 PTGS2P35354 604 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 PKNOX1P55347 436 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 SLC37A1P57057 533 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 TRA2BP62995 288 aaKnown RBP6.39□□□□□ -1.39
SF3B3-209ENST00000567635 HSF1Q00613 529 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 PLGLB1Q02325 96 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 TBL3Q12788 808 aaKnown RBP6.39□□□□□ -1.39
SF3B3-209ENST00000567635 RASA2Q15283 850 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 CMPK2Q5EBM0 449 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 PAOXQ6QHF9 649 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 GK5Q6ZS86 529 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 FAM47EQ6ZV65 393 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 GPRIN3Q6ZVF9 776 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 COMMD6Q7Z4G1 85 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 FGD2Q7Z6J4 655 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 SLC22A16Q86VW1 577 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 CHERPQ8IWX8 916 aaKnown RBP6.39□□□□□ -1.39
SF3B3-209ENST00000567635 C9orf40Q8IXQ3 194 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 DND1Q8IYX4 353 aaKnown RBP6.39□□□□□ -1.39
SF3B3-209ENST00000567635 EID3Q8N140 333 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 CDYL2Q8N8U2 506 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 OR52N2Q8NGI0 321 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 FAM57AQ8TBR7 257 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 METTL6Q8TCB7 284 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 SLC22A8Q8TCC7 542 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 AGAP11Q8TF27 550 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 CHTF18Q8WVB6 975 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 TP53INP1Q96A56 240 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 TM4SF18Q96CE8 201 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 CCDC126Q96EE4 140 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 L3HYPDHQ96EM0 354 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 ZNF382Q96SR6 550 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 VKORC1Q9BQB6 163 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 EPB41L4BQ9H329 900 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 ANKZF1Q9H8Y5 726 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 CXorf21Q9HAI6 301 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 IL1RL2Q9HB29 575 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 TEX10Q9NXF1 929 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-209ENST00000567635 CNIH4Q9P003 139 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 PSMC3IPQ9P2W1 217 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-209ENST00000567635 GRID1Q9ULK0 1009 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 ENTPD4Q9Y227 616 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 STK38LQ9Y2H1 464 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 PCDHA9Q9Y5H5 950 aa6.39□□□□□ -1.39
SF3B3-209ENST00000567635 KLF2Q9Y5W3 355 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-209ENST00000567635 MED12LQ86YW9 2145 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 DOCK7Q96N67 2140 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 A0A0G2JMM0 328 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 C2orf92A0A1B0GVN3 265 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 A0A1W2PPB8 328 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 A0A1W2PRS3 328 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 A0A1W2PS29 197 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 C1orf226A1L170 272 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 CCDC151A5D8V7 595 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 GOLGA6L10A6NI86 522 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 FAM166BA8MTA8 275 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 KIR3DP1A8MWS1 328 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 CAPN14A8MX76 684 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 FOXO6A8MYZ6 492 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 G3V2L1 256 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 ADAM10O14672 748 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 HNRNPRO43390 633 aaKnown RBP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 ATP8B1O43520 1251 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 GLSO94925 669 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 NADKO95544 446 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 SHBGP04278 402 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 ENO1P06733 434 aaKnown RBP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 TPOP07202 933 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 CCL3P10147 92 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 MYL2P10916 166 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 CSNK2A2P19784 350 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 S1PR1P21453 382 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 NT5EP21589 574 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 HTR1EP28566 365 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 HMOX2P30519 316 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 SSTR4P31391 388 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 CCT5P48643 541 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 NAA20P61599 178 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 ADORA2A-AS1P86434 159 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 GALNT1Q10472 559 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 FUT7Q11130 342 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 FOXO1Q12778 655 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 MAP4K2Q12851 820 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 CSTF3Q12996 717 aaKnown RBP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 SLC10A1Q14973 349 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 ZNF630Q2M218 657 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-209ENST00000567635 HYAL4Q2M3T9 481 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 C6orf163Q5TEZ5 329 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 HLA-DQA1Q5Y7H0 255 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 TMEM211Q6ICI0 200 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 SLC48A1Q6P1K1 146 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 WDR93Q6P2C0 686 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 ARHGAP11AQ6P4F7 1023 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 LYPD8Q6UX82 237 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 ZYG11AQ6WRX3 759 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 C3P1Q6ZMU1 363 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 SH2D5Q6ZV89 423 aa6.38□□□□□ -1.39
SF3B3-209ENST00000567635 GALNT12Q8IXK2 581 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms