RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 PRIM2P49643 509 aa20.6■□□□□ 0.89
LINC01960-201ENST00000563759 MRPS35P82673 323 aaKnown RBP20.6■□□□□ 0.89
LINC01960-201ENST00000563759 PWWP2BQ6NUJ5 590 aa20.6■□□□□ 0.89
LINC01960-201ENST00000563759 ZFP1Q6P2D0 407 aa20.6■□□□□ 0.89
LINC01960-201ENST00000563759 TNFAIP8L2Q6P589 184 aaPredicted RBP20.6■□□□□ 0.89
LINC01960-201ENST00000563759 ENDOVQ8N8Q3 282 aaKnown RBP20.6■□□□□ 0.89
LINC01960-201ENST00000563759 TCRBV3S1A0A5B6 114 aa20.59■□□□□ 0.89
LINC01960-201ENST00000563759 EMC8O43402 210 aa20.59■□□□□ 0.89
LINC01960-201ENST00000563759 OR10H2O60403 315 aa20.59■□□□□ 0.89
LINC01960-201ENST00000563759 TIAF1O95411 115 aa20.59■□□□□ 0.89
LINC01960-201ENST00000563759 NT5EP21589 574 aa20.59■□□□□ 0.89
LINC01960-201ENST00000563759 ILKQ13418 452 aa20.59■□□□□ 0.89
LINC01960-201ENST00000563759 ADRM1Q16186 407 aa20.59■□□□□ 0.89
LINC01960-201ENST00000563759 MFSD4BQ5TF39 518 aa20.59■□□□□ 0.89
LINC01960-201ENST00000563759 CEACAM20Q6UY09 585 aa20.59■□□□□ 0.89
LINC01960-201ENST00000563759 C11orf65Q8NCR3 313 aa20.59■□□□□ 0.89
LINC01960-201ENST00000563759 MAL2Q969L2 176 aa20.59■□□□□ 0.89
LINC01960-201ENST00000563759 OR1F2PQ96R84 312 aa20.59■□□□□ 0.89
LINC01960-201ENST00000563759 RASSF4Q9H2L5 321 aa20.59■□□□□ 0.89
LINC01960-201ENST00000563759 GORASP2Q9H8Y8 452 aa20.59■□□□□ 0.89
LINC01960-201ENST00000563759 APMAPQ9HDC9 416 aa20.59■□□□□ 0.89
LINC01960-201ENST00000563759 NKX1-2Q9UD57 310 aaPredicted RBP20.59■□□□□ 0.89
LINC01960-201ENST00000563759 CTNSO60931 367 aa20.58■□□□□ 0.89
LINC01960-201ENST00000563759 TNFRSF21O75509 655 aa20.58■□□□□ 0.89
LINC01960-201ENST00000563759 JRKO75564 520 aa20.58■□□□□ 0.89
LINC01960-201ENST00000563759 PSMA4P25789 261 aaKnown RBP20.58■□□□□ 0.89
LINC01960-201ENST00000563759 CCKBRP32239 447 aa20.58■□□□□ 0.89
LINC01960-201ENST00000563759 HSD17B7P56937 341 aa20.58■□□□□ 0.89
LINC01960-201ENST00000563759 DSTNP60981 165 aa20.58■□□□□ 0.89
LINC01960-201ENST00000563759 IL11RAQ14626 422 aa20.58■□□□□ 0.89
LINC01960-201ENST00000563759 BPHLQ86WA6 291 aaPredicted RBP20.58■□□□□ 0.89
LINC01960-201ENST00000563759 AKAP7Q9P0M2 348 aaPredicted RBP20.58■□□□□ 0.89
LINC01960-201ENST00000563759 STX18Q9P2W9 335 aaKnown RBP20.58■□□□□ 0.89
LINC01960-201ENST00000563759 DHRS12A0PJE2 317 aa20.58■□□□□ 0.88
LINC01960-201ENST00000563759 POLR1CO15160 346 aaPredicted RBP20.58■□□□□ 0.88
LINC01960-201ENST00000563759 FOXD2O60548 495 aaPredicted RBP20.58■□□□□ 0.88
LINC01960-201ENST00000563759 BMP10O95393 424 aa20.58■□□□□ 0.88
LINC01960-201ENST00000563759 MAOAP21397 527 aa20.58■□□□□ 0.88
LINC01960-201ENST00000563759 SESN3P58005 492 aa20.58■□□□□ 0.88
LINC01960-201ENST00000563759 BTG2P78543 158 aa20.58■□□□□ 0.88
LINC01960-201ENST00000563759 E2F1Q01094 437 aa20.58■□□□□ 0.88
LINC01960-201ENST00000563759 MTX3Q5HYI7 312 aa20.58■□□□□ 0.88
LINC01960-201ENST00000563759 HORMAD2Q8N7B1 307 aa20.58■□□□□ 0.88
LINC01960-201ENST00000563759 NUP43Q8NFH3 380 aa20.58■□□□□ 0.88
LINC01960-201ENST00000563759 OR7G2Q8NG99 324 aa20.58■□□□□ 0.88
LINC01960-201ENST00000563759 CTRCQ99895 268 aa20.58■□□□□ 0.88
LINC01960-201ENST00000563759 ANKRA2Q9H9E1 313 aa20.58■□□□□ 0.88
LINC01960-201ENST00000563759 V9GYQ6 96 aa20.58■□□□□ 0.88
LINC01960-201ENST00000563759 CREG1O75629 220 aa20.57■□□□□ 0.88
LINC01960-201ENST00000563759 SLITRK5O94991 958 aa20.57■□□□□ 0.88
LINC01960-201ENST00000563759 BAG2O95816 211 aa20.57■□□□□ 0.88
LINC01960-201ENST00000563759 HMGN2P05204 90 aaKnown RBP20.57■□□□□ 0.88
LINC01960-201ENST00000563759 HBQ1P09105 142 aa20.57■□□□□ 0.88
LINC01960-201ENST00000563759 SLC35E2P0CK97 266 aa20.57■□□□□ 0.88
LINC01960-201ENST00000563759 FGF5P12034 268 aa20.57■□□□□ 0.88
LINC01960-201ENST00000563759 LASP1Q14847 261 aaKnown RBP20.57■□□□□ 0.88
LINC01960-201ENST00000563759 MINDY4Q4G0A6 757 aa20.57■□□□□ 0.88
LINC01960-201ENST00000563759 ZNF628Q5EBL2 1059 aa20.57■□□□□ 0.88
LINC01960-201ENST00000563759 BMPERQ8N8U9 685 aa20.57■□□□□ 0.88
LINC01960-201ENST00000563759 CMKLR1Q99788 373 aa20.57■□□□□ 0.88
LINC01960-201ENST00000563759 EQTNQ9NQ60 294 aa20.57■□□□□ 0.88
LINC01960-201ENST00000563759 PTGFRNQ9P2B2 879 aa20.57■□□□□ 0.88
LINC01960-201ENST00000563759 ANGPTL2Q9UKU9 493 aa20.57■□□□□ 0.88
LINC01960-201ENST00000563759 AURKCQ9UQB9 309 aa20.57■□□□□ 0.88
LINC01960-201ENST00000563759 OR2W5A6NFC9 320 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 IL10P22301 178 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 TGM1P22735 817 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 PCGF2P35227 344 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 KHKP50053 298 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 ANXA11P50995 505 aaKnown RBP20.56■□□□□ 0.88
LINC01960-201ENST00000563759 VEZF1Q14119 521 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 LRRC23Q53EV4 343 aaPredicted RBP20.56■□□□□ 0.88
LINC01960-201ENST00000563759 ST13P4Q8IZP2 240 aaPredicted RBP20.56■□□□□ 0.88
LINC01960-201ENST00000563759 GOLM1Q8NBJ4 401 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 PPWD1Q96BP3 646 aaKnown RBP20.56■□□□□ 0.88
LINC01960-201ENST00000563759 MS4A4EQ96PG1 132 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 ALOXE3Q9BYJ1 711 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 STRADBQ9C0K7 418 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 OR51I1Q9H343 314 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 TMEM38AQ9H6F2 299 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 TCRBV5S2A0A599 114 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 H3BNX3 289 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 TGFBR3LH3BV60 316 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 UPK1AO00322 258 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 PLOD2O00469 737 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 GPIP06744 558 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 BMP2P12643 396 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 CCL4P13236 92 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 ANPEPP15144 967 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 INSM1Q01101 510 aaPredicted RBP20.56■□□□□ 0.88
LINC01960-201ENST00000563759 RBBP4Q09028 425 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 SCARB2Q14108 478 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 ZNF630Q2M218 657 aaPredicted RBP20.56■□□□□ 0.88
LINC01960-201ENST00000563759 STPG1Q5TH74 334 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 FAM111BQ6SJ93 734 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 OR2L13Q8N349 312 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 SLC38A9Q8NBW4 561 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 NETO1Q8TDF5 533 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 CANT1Q8WVQ1 401 aa20.56■□□□□ 0.88
LINC01960-201ENST00000563759 RBM18Q96H35 190 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms