RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 TMEM30BQ3MIR4 351 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 TMEM31Q5JXX7 168 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 KLC3Q6P597 504 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 TRIM65Q6PJ69 517 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 SASS6Q6UVJ0 657 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 RBMS3Q6XE24 437 aaKnown RBP4.43□□□□□ -1.7
LINC00254-201ENST00000563416 APTXQ7Z2E3 356 aaKnown RBP4.43□□□□□ -1.7
LINC00254-201ENST00000563416 HOOK3Q86VS8 718 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 MFSD6LQ8IWD5 586 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 CMTM8Q8IZV2 173 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 PSMA8Q8TAA3 256 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 MRPS31Q92665 395 aaKnown RBP4.43□□□□□ -1.7
LINC00254-201ENST00000563416 DNASE1L2Q92874 299 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 LGALS12Q96DT0 336 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 FAM81BQ96LP2 452 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 SLC22A12Q96S37 553 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 KCNK16Q96T55 309 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 BPIFA3Q9BQP9 254 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 TUBGCP2Q9BSJ2 902 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 MED10Q9BTT4 135 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 DUSP16Q9BY84 665 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 HSD3B7Q9H2F3 369 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 KCNK15Q9H427 330 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 ZFP14Q9HCL3 533 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 SIX2Q9NPC8 291 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 SAMSN1Q9NSI8 373 aaKnown RBP4.43□□□□□ -1.7
LINC00254-201ENST00000563416 FAM49BQ9NUQ9 324 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 PCDHGA5Q9Y5G8 931 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 THADAQ6YHU6 1953 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 PI4KAP42356 2102 aa4.43□□□□□ -1.7
LINC00254-201ENST00000563416 SHROOM3Q8TF72 1996 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 TRAV19A0A0A6YYK7 116 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 ZNF840PA6NDX5 716 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 OOEPA6NGQ2 149 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 SHISA7A6NL88 538 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 HEPACAM2A8MVW5 462 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 O00370 1275 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 SLC33A1O00400 549 aaPredicted RBP4.42□□□□□ -1.7
LINC00254-201ENST00000563416 CHADO15335 359 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 SPRY1O43609 319 aaPredicted RBP4.42□□□□□ -1.7
LINC00254-201ENST00000563416 ZG16O60844 167 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 RSL1D1O76021 490 aaKnown RBP4.42□□□□□ -1.7
LINC00254-201ENST00000563416 PDGFBP01127 241 aaPredicted RBP4.42□□□□□ -1.7
LINC00254-201ENST00000563416 LINGO3P0C6S8 592 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 IGHV4-38-2P0DP08 117 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 CKMT2P17540 419 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 IL10P22301 178 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 EEF1B2P24534 225 aaKnown RBP4.42□□□□□ -1.7
LINC00254-201ENST00000563416 PTPN3P26045 913 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 ADORA2BP29275 332 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 CHRNB4P30926 498 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 PRKCIP41743 596 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 MTIF2P46199 727 aaKnown RBP4.42□□□□□ -1.7
LINC00254-201ENST00000563416 NR0B1P51843 470 aaKnown RBP4.42□□□□□ -1.7
LINC00254-201ENST00000563416 NAGLUP54802 743 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 MAP3K7CLP57077 242 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 STARD6P59095 220 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 STX1BP61266 288 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 RPS18P62269 152 aaKnown RBP4.42□□□□□ -1.7
LINC00254-201ENST00000563416 SLC7A9P82251 487 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 TAF10Q12962 218 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 LASP1Q14847 261 aaKnown RBP4.42□□□□□ -1.7
LINC00254-201ENST00000563416 PPA1Q15181 289 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 KRT31Q15323 416 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 DLG2Q15700 870 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 ZNF77Q15935 545 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 EXOC3L4Q17RC7 722 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 C6orf136Q5SQH8 315 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 GCNT6Q5T4J0 391 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 C6orf163Q5TEZ5 329 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 TMEM211Q6ICI0 200 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 ARHGAP11AQ6P4F7 1023 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 TMEM270Q6UE05 265 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 LCLAT1Q6UWP7 414 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 GBP6Q6ZN66 633 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 SHC3Q92529 594 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 SPACA9Q96E40 222 aaPredicted RBP4.42□□□□□ -1.7
LINC00254-201ENST00000563416 MSANTD3Q96H12 275 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 PDLIM5Q96HC4 596 aaKnown RBP4.42□□□□□ -1.7
LINC00254-201ENST00000563416 LRRC3BQ96PB8 259 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 INTS14Q96SY0 518 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 CRACR2AQ9BSW2 395 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 SPXQ9BT56 116 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 UBXN6Q9BZV1 441 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 FBXO44Q9H4M3 255 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 CNOT10Q9H9A5 744 aaKnown RBP4.42□□□□□ -1.7
LINC00254-201ENST00000563416 TSPAN16Q9UKR8 245 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 KIAA1257Q9ULG3 409 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 SCML2Q9UQR0 700 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 CCL26Q9Y258 94 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 ZNF292O60281 2723 aa4.42□□□□□ -1.7
LINC00254-201ENST00000563416 DOCK9Q9BZ29 2069 aa4.41□□□□□ -1.7
LINC00254-201ENST00000563416 A0A1W2PRV1 198 aa4.41□□□□□ -1.7
LINC00254-201ENST00000563416 DUXAA6NLW8 204 aa4.41□□□□□ -1.7
LINC00254-201ENST00000563416 SLC30A4O14863 429 aa4.41□□□□□ -1.7
LINC00254-201ENST00000563416 XPO1O14980 1071 aaKnown RBP4.41□□□□□ -1.7
LINC00254-201ENST00000563416 PRAMEF11O60813 436 aa4.41□□□□□ -1.7
LINC00254-201ENST00000563416 SEC22BO75396 215 aa4.41□□□□□ -1.7
LINC00254-201ENST00000563416 LETM1O95202 739 aaPredicted RBP4.41□□□□□ -1.7
LINC00254-201ENST00000563416 CGAP01215 116 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms