RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 EPCAMP16422 314 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 ENGP17813 658 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 IGFBP6P24592 240 aaPredicted RBP4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 SSTR1P30872 391 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 PTGS2P35354 604 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 PTGER4P35408 488 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 ALDH3B1P43353 468 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 COMPP49747 757 aaPredicted RBP4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 MRPS15P82914 257 aaKnown RBP4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 DMPKQ09013 629 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 PJVKQ0ZLH3 352 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 ELAVL1Q15717 326 aaKnown RBP4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 PARP6Q2NL67 630 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 HKDC1Q2TB90 917 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 POM121L1PQ3SYA9 428 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 BEX5Q5H9J7 111 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 LRRC8BQ6P9F7 803 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 ZNF600Q6ZNG1 722 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 ZBTB8OSQ8IWT0 167 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 FBXO16Q8IX29 292 aaPredicted RBP4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 GPR137CQ8N3F9 429 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 SMYD1Q8NB12 490 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 OR4K14Q8NGD5 310 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 KCNG3Q8TAE7 436 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 MITD1Q8WV92 249 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 KIFAP3Q92845 792 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 LRRC45Q96CN5 670 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 IGSF21Q96ID5 467 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 PRRC1Q96M27 445 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 GPR137Q96N19 417 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 SLC22A12Q96S37 553 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 CBWD1Q9BRT8 395 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 CPVLQ9H3G5 476 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 R3HDMLQ9H3Y0 253 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 ZDHHC6Q9H6R6 413 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 RMND1Q9NWS8 449 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 IL20Q9NYY1 176 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 PKD2L2Q9NZM6 624 aa4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 GREB1LQ9C091 1923 aaPredicted RBP4.83□□□□□ -1.64
VPS35P1-201ENST00000563400 PRSS51A0A1B0GVH4 220 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 A0A1W2PPC1 479 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 NPIPA2E9PIF3 369 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 PPIAL4DF5H284 164 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 HAS3O00219 553 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 OR1F1O43749 312 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 UPK3AO75631 287 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 OPN1LWP04000 364 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CYP1A1P04798 512 aaPredicted RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 MMP3P08254 477 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 ADRB1P08588 477 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 F7P08709 466 aaPredicted RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 GOT1P17174 413 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 AXLP30530 894 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 TRIM23P36406 574 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 SLC9A3P48764 834 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 TNFSF10P50591 281 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CCNHP51946 323 aaPredicted RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 ARHGDIBP52566 201 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 SELENOVP59797 346 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CYP4F2P78329 520 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 GRIK2Q13002 908 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 KEAP1Q14145 624 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 BTG3Q14201 252 aaPredicted RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 KPNB1Q14974 876 aaKnown RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 STX1AQ16623 288 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CCL14Q16627 93 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 UBE2SQ16763 222 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 ZNF568Q3ZCX4 644 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 LCN1P1Q5VSP4 162 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 C1QL3Q5VWW1 255 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 NKAIN2Q5VXU1 208 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 DENND2CQ68D51 928 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 SP5Q6BEB4 398 aaPredicted RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 NCAPH2Q6IBW4 605 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 SLC39A4Q6P5W5 647 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 TMEM220Q6QAJ8 160 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 IL17RELQ6ZVW7 336 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 ANKRD33Q7Z3H0 272 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 AMIGO1Q86WK6 493 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 FAM114A1Q8IWE2 563 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 LINC01465Q8N7H1 131 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 KLHDC9Q8NEP7 349 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 PYCR2Q96C36 320 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 MRPL53Q96EL3 112 aaKnown RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 SENP5Q96HI0 755 aaPredicted RBP4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CEP170P1Q96L14 293 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 VPS35Q96QK1 796 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 MMS19Q96T76 1030 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 ANKRD60Q9BZ19 345 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 TRIM9Q9C026 710 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 LHPPQ9H008 270 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 ELOVL3Q9HB03 270 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 ZNF160Q9HCG1 818 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 HIF1ANQ9NWT6 349 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 P2RX2Q9UBL9 471 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 LCMT1Q9UIC8 334 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 CDH9Q9ULB4 789 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 TMED7Q9Y3B3 224 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 LRP12Q9Y561 859 aa4.82□□□□□ -1.64
VPS35P1-201ENST00000563400 SRPRBQ9Y5M8 271 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms