RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 SYBUQ9NX95 663 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 SMPD4Q9NXE4 827 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 FBLN5Q9UBX5 448 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 PITPNC1Q9UKF7 332 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 KCNJ14Q9UNX9 436 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 USH1CQ9Y6N9 552 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 CNTNAP4Q9C0A0 1308 aa4.5□□□□□ -1.69
SMG1-207ENST00000563235 CEMIPQ8WUJ3 1361 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 ZNF729A6NN14 1252 aaPredicted RBP4.49□□□□□ -1.69
SMG1-207ENST00000563235 SPATA31C2B4DYI2 1134 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 ANKRD65E5RJM6 399 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 GNB5O14775 395 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 MED6O75586 246 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 NR2F6P10588 404 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 SLC2A1P11166 492 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 IGFBP2P18065 325 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 EFNA1P20827 205 aaPredicted RBP4.49□□□□□ -1.69
SMG1-207ENST00000563235 ELAVL4P26378 380 aaKnown RBP4.49□□□□□ -1.69
SMG1-207ENST00000563235 MARCKSP29966 332 aaPredicted RBP4.49□□□□□ -1.69
SMG1-207ENST00000563235 PPP2R1BP30154 601 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 CASP14P31944 242 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 UGT2B10P36537 528 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 MPLP40238 635 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 AQP2P41181 271 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 GPR12P47775 334 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 RPL11P62913 178 aaKnown RBP4.49□□□□□ -1.69
SMG1-207ENST00000563235 MC2RQ01718 297 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 DHODHQ02127 395 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 EGR3Q06889 387 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 ACSM2AQ08AH3 577 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 FLOT2Q14254 428 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 PON3Q15166 354 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 MICBQ29980 383 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 LACTB2Q53H82 288 aaPredicted RBP4.49□□□□□ -1.69
SMG1-207ENST00000563235 LGSNQ5TDP6 509 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 ACSM2BQ68CK6 577 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 C5orf46Q6UWT4 87 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 SEM1Q6ZVN7 128 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 ARCQ7LC44 396 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 SMIM15Q7Z3B0 74 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 TMEM126BQ8IUX1 230 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 KLHDC8AQ8IYD2 350 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 ACBD4Q8NC06 268 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 NEK7Q8TDX7 302 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 DNAJB3Q8WWF6 145 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 AP3S1Q92572 193 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 FSD1LQ9BXM9 530 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 DGCR6LQ9BY27 220 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 SLC39A8Q9C0K1 460 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 KCNK15Q9H427 330 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 TMLHEQ9NVH6 421 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 STMN3Q9NZ72 180 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 MARCH2Q9P0N8 246 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 COPS7AQ9UBW8 275 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 ANAPC7Q9UJX3 599 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 NAGPAQ9UK23 515 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 IKZF3Q9UKT9 509 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 NDRG2Q9UN36 371 aaKnown RBP4.49□□□□□ -1.69
SMG1-207ENST00000563235 CSDC2Q9Y534 153 aaKnown RBP4.49□□□□□ -1.69
SMG1-207ENST00000563235 SLCO1B1Q9Y6L6 691 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 BCL9O00512 1426 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 ABCC6O95255 1503 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 A0A1B0GTH6 734 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 FAM90A10PA6NDY2 464 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 ZNF233A6NK53 670 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 ADM5C9JUS6 153 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 HSPA12AO43301 675 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 TSPAN2O60636 221 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 ZNF217O75362 1048 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 RSL1D1O76021 490 aaKnown RBP4.49□□□□□ -1.69
SMG1-207ENST00000563235 OR6A2O95222 327 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 TOP3BO95985 862 aaKnown RBP4.49□□□□□ -1.69
SMG1-207ENST00000563235 NDUFB10O96000 172 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 RAB40ALP0C0E4 278 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 SLC2A4P14672 509 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 GKP32189 559 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 TGM4P49221 684 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 PTTG1IPP53801 180 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 FOXL2P58012 376 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 TXNL4AP83876 142 aaKnown RBP4.49□□□□□ -1.69
SMG1-207ENST00000563235 FLI1Q01543 452 aaPredicted RBP4.49□□□□□ -1.69
SMG1-207ENST00000563235 ILF2Q12905 390 aaKnown RBP4.49□□□□□ -1.69
SMG1-207ENST00000563235 ADGRE1Q14246 886 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 ZNHIT3Q15649 155 aaPredicted RBP4.49□□□□□ -1.69
SMG1-207ENST00000563235 LTB4RQ15722 352 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 NPTX1Q15818 432 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 PSG3Q16557 428 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 C5orf47Q569G3 176 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 SEL1L3Q68CR1 1132 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 OR52W1Q6IF63 320 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 GRASPQ7Z6J2 395 aaPredicted RBP4.49□□□□□ -1.69
SMG1-207ENST00000563235 GLB1L2Q8IW92 636 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 STHQ8IWL8 128 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 HS3ST5Q8IZT8 346 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 CRIPAKQ8N1N5 446 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 HORMAD2Q8N7B1 307 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 C11orf44Q8N8P7 122 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 CHPT1Q8WUD6 406 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 UBTD2Q8WUN7 234 aa4.49□□□□□ -1.69
SMG1-207ENST00000563235 ASB11Q8WXH4 323 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms