RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 LIX1Q8N485 282 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 FNDC5Q8NAU1 212 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 C17orf47Q8NEP4 570 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 OR7G1Q8NGA0 311 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 RIT1Q92963 219 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 PPWD1Q96BP3 646 aaKnown RBP12.48□□□□□ -0.41
CDH1-204ENST00000562118 TSSK3Q96PN8 268 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 NTMQ9P121 344 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 G3BP2Q9UN86 482 aaKnown RBP12.48□□□□□ -0.41
CDH1-204ENST00000562118 USH1CQ9Y6N9 552 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 CNTRLQ7Z7A1 2325 aa12.48□□□□□ -0.41
CDH1-204ENST00000562118 MYOCOSA0A1B0GUC4 107 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 A8MUA0 341 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 PLOD2O00469 737 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 SCAMP2O15127 329 aaKnown RBP12.47□□□□□ -0.41
CDH1-204ENST00000562118 MAN1A2O60476 641 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 PLOD3O60568 738 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 EDF1O60869 148 aaKnown RBP12.47□□□□□ -0.41
CDH1-204ENST00000562118 SORBS2O94875 1100 aaKnown RBP12.47□□□□□ -0.41
CDH1-204ENST00000562118 CBX7O95931 251 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 IFNA16P05015 189 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 G6PDP11413 515 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 LBPP18428 481 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 RPL3P39023 403 aaKnown RBP12.47□□□□□ -0.41
CDH1-204ENST00000562118 DIO3P55073 304 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 EBPQ15125 230 aaKnown RBP12.47□□□□□ -0.41
CDH1-204ENST00000562118 SLC9B1Q4ZJI4 515 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 HSP90B2PQ58FF3 399 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 ACER2Q5QJU3 275 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 B3GNTL1Q67FW5 361 aaPredicted RBP12.47□□□□□ -0.41
CDH1-204ENST00000562118 ASB18Q6ZVZ8 466 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 SLC5A8Q8N695 610 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 SIRT6Q8N6T7 355 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 PSMA8Q8TAA3 256 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 HOXB13Q92826 284 aaPredicted RBP12.47□□□□□ -0.41
CDH1-204ENST00000562118 COQ8BQ96D53 544 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 ZNF354BQ96LW1 612 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 C1orf50Q9BV19 199 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 KCNK13Q9HB14 408 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 ACSS1Q9NUB1 689 aaPredicted RBP12.47□□□□□ -0.41
CDH1-204ENST00000562118 AIG1Q9NVV5 245 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 PTGFRNQ9P2B2 879 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 MARCOQ9UEW3 520 aaPredicted RBP12.47□□□□□ -0.41
CDH1-204ENST00000562118 BAIAP2L1Q9UHR4 511 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 MAPRE3Q9UPY8 281 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 PCDHGB6Q9Y5F9 930 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 ZNF780BQ9Y6R6 833 aa12.47□□□□□ -0.41
CDH1-204ENST00000562118 A0A087WV62 115 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 TRBV11-1A0A0K0K1C0 115 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 GABRR3A8MPY1 467 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 OR10H2O60403 315 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 DPM1O60762 260 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 ERAL1O75616 437 aaKnown RBP12.46□□□□□ -0.41
CDH1-204ENST00000562118 ZFAND5O76080 213 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 NADKO95544 446 aaPredicted RBP12.46□□□□□ -0.41
CDH1-204ENST00000562118 PRPS1L1P21108 318 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 EPHA3P29320 983 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 FEN1P39748 380 aaKnown RBP12.46□□□□□ -0.41
CDH1-204ENST00000562118 ALDH9A1P49189 494 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 RNF4P78317 190 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 RAPSNQ13702 412 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 MEP1AQ16819 746 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 IRAK1BP1Q5VVH5 260 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 HSDL2Q6YN16 418 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 R3HCC1LQ7Z5L2 792 aaKnown RBP12.46□□□□□ -0.41
CDH1-204ENST00000562118 SPATA19Q7Z5L4 167 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 ZNF227Q86WZ6 799 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 FAM9CQ8IZT9 166 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 VWA5B2Q8N398 1253 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 NATD1Q8N6N6 113 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 Q8NA96 180 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 OR8J2Q8NGG1 315 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 DYDC1Q8WWB3 177 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 TM9SF4Q92544 642 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 EXOSC8Q96B26 276 aaKnown RBP12.46□□□□□ -0.41
CDH1-204ENST00000562118 TESCQ96BS2 214 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 AMDHD1Q96NU7 426 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 OR8D2Q9GZM6 311 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 GLIPR2Q9H4G4 154 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 MIEF1Q9NQG6 463 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.46□□□□□ -0.41
CDH1-204ENST00000562118 MYOTQ9UBF9 498 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 COPS7AQ9UBW8 275 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 TEKT2Q9UIF3 430 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 ERVK-19Q9WJR5 959 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 ENTPD4Q9Y227 616 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 EIF3LQ9Y262 564 aaKnown RBP12.46□□□□□ -0.41
CDH1-204ENST00000562118 GPR45Q9Y5Y3 372 aa12.46□□□□□ -0.41
CDH1-204ENST00000562118 DYRK3O43781 588 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 SCN2BO60939 215 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 KITP10721 976 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 MPIP34949 423 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 HPCAL1P37235 193 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 EMDP50402 254 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 TNFSF10P50591 281 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 LTB4RQ15722 352 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 EXOSC6Q5RKV6 272 aaKnown RBP12.45□□□□□ -0.42
CDH1-204ENST00000562118 SLC6A19Q695T7 634 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 FAM180BQ6P0A1 224 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 LYPD8Q6UX82 237 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms