RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 RNASE12Q5GAN4 147 aaKnown RBP15.65■□□□□ 0.1
TPM1-228ENST00000560975 LRRC73Q5JTD7 316 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 ADGRD2Q7Z7M1 963 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 C2orf69Q8N8R5 385 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 NEIL3Q8TAT5 605 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 POF1BQ8WVV4 589 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 RIT1Q92963 219 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 RNFT2Q96EX2 444 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 MRPL9Q9BYD2 267 aaKnown RBP15.65■□□□□ 0.1
TPM1-228ENST00000560975 REEP4Q9H6H4 257 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 SEMA3GQ9NS98 782 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 ZDHHC3Q9NYG2 299 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 CLCA2Q9UQC9 943 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 PRR23AA6NEV1 266 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 SGK494L7N484 410 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 BCHEP06276 602 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 CSNK1DP48730 415 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 SRP9P49458 86 aaKnown RBP15.64■□□□□ 0.09
TPM1-228ENST00000560975 PCBP3P57721 371 aaKnown RBP15.64■□□□□ 0.09
TPM1-228ENST00000560975 GPR33Q49SQ1 333 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 CDKL4Q5MAI5 379 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 TCTN3Q6NUS6 607 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 TRILQ7L0X0 811 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 CHMP1BQ7LBR1 199 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 HS6ST3Q8IZP7 471 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 MMP21Q8N119 569 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 ZBTB44Q8NCP5 570 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 SLC9A6Q92581 669 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 ASIC4Q96FT7 647 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 RSPO3Q9BXY4 272 aaPredicted RBP15.64■□□□□ 0.09
TPM1-228ENST00000560975 RANBP3Q9H6Z4 567 aaPredicted RBP15.64■□□□□ 0.09
TPM1-228ENST00000560975 CTPS2Q9NRF8 586 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 SLCO1C1Q9NYB5 712 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 ZNF624Q9P2J8 865 aaPredicted RBP15.64■□□□□ 0.09
TPM1-228ENST00000560975 TESQ9UGI8 421 aaKnown RBP15.64■□□□□ 0.09
TPM1-228ENST00000560975 CD84Q9UIB8 345 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 KCND3Q9UK17 655 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 RPS10-NUDT3A0A1W2PQS6 291 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 ARRDC5A6NEK1 342 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 NPIPB15A6NHN6 443 aaPredicted RBP15.64■□□□□ 0.09
TPM1-228ENST00000560975 TMEM88BA6NKF7 163 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 C5orf58C9J3I9 102 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 STK25O00506 426 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 SERPINI2O75830 405 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 MPC2O95563 127 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 SOD1P00441 154 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 CFDP00746 253 aaPredicted RBP15.64■□□□□ 0.09
TPM1-228ENST00000560975 H1F0P07305 194 aaKnown RBP15.64■□□□□ 0.09
TPM1-228ENST00000560975 OR56A5P0C7T3 313 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 ARAFP10398 606 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 ICAM2P13598 275 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 SLC6A1P30531 599 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 ATP12AP54707 1039 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 C21orf58P58505 322 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 PRSS53Q2L4Q9 553 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 CCSMST1Q4G0I0 132 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 GPR139Q6DWJ6 353 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 KIAA1324Q6UXG2 1013 aaKnown RBP15.64■□□□□ 0.09
TPM1-228ENST00000560975 TPGS1Q6ZTW0 290 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 LUZP2Q86TE4 346 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 LMNTD1Q8N9Z9 388 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 OR7G3Q8NG95 312 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 GPR32P1Q8NGA4 272 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 PPCDCQ96CD2 204 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 CLEC4MQ9H2X3 399 aaPredicted RBP15.64■□□□□ 0.09
TPM1-228ENST00000560975 BRCA2P51587 3418 aa15.64■□□□□ 0.09
TPM1-228ENST00000560975 SERTM1A2A2V5 107 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 GSAPA4D1B5 854 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 SH3BP5O60239 455 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 NME6O75414 186 aaPredicted RBP15.63■□□□□ 0.09
TPM1-228ENST00000560975 TOXO94900 526 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 CELP19835 753 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 GABRA5P31644 462 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 CLCNKAP51800 687 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 DCDC1P59894 354 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 DSTNP60981 165 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 BTN1A1Q13410 526 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 PIN1Q13526 163 aaPredicted RBP15.63■□□□□ 0.09
TPM1-228ENST00000560975 TPBGQ13641 420 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 GRK1Q15835 563 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 IDNKQ5T6J7 187 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 METAP1DQ6UB28 335 aaPredicted RBP15.63■□□□□ 0.09
TPM1-228ENST00000560975 HMGN2P46Q86SG4 172 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 BEST4Q8NFU0 473 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 SLC7A13Q8TCU3 470 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 RAB8BQ92930 207 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 OTULINQ96BN8 352 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 BHLHE41Q9C0J9 482 aaPredicted RBP15.63■□□□□ 0.09
TPM1-228ENST00000560975 MTMR11A4FU01 709 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 TBL1XO60907 577 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 DHFRP00374 187 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 TFPIP10646 304 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 ANXA3P12429 323 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 PRKACAP17612 351 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 SMSP52788 366 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 RPL6Q02878 288 aaKnown RBP15.63■□□□□ 0.09
TPM1-228ENST00000560975 ZMYND11Q15326 602 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 LGALSLQ3ZCW2 172 aaPredicted RBP15.63■□□□□ 0.09
TPM1-228ENST00000560975 TMEM107Q6UX40 140 aa15.63■□□□□ 0.09
TPM1-228ENST00000560975 RSPO2Q6UXX9 243 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms