RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 SLC37A1P57057 533 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 PLGLB1Q02325 96 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 MPEG1Q2M385 716 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 CEP85LQ5SZL2 805 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 C1QL3Q5VWW1 255 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 CLEC18BQ6UXF7 455 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 RTL4Q6ZR62 310 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 FJX1Q86VR8 437 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 LRRC25Q8N386 305 aaPredicted RBP12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 VWA5B2Q8N398 1253 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 CLEC18CQ8NCF0 446 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 FAM13CQ8NE31 585 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 PPP1R14CQ8TAE6 165 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 NUBPLQ8TB37 319 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 AGR3Q8TD06 166 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 EXOSC8Q96B26 276 aaKnown RBP12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 TRMOQ9BU70 441 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 CXorf21Q9HAI6 301 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 EML4Q9HC35 981 aaKnown RBP12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 GIMAP4Q9NUV9 329 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 SENP1Q9P0U3 644 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 ERRFI1Q9UJM3 462 aaPredicted RBP12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 RAB21Q9UL25 225 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 ENTPD4Q9Y227 616 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 POLR3HQ9Y535 204 aaPredicted RBP12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 ZGRF1Q86YA3 2104 aa12.01□□□□□ -0.49
CTDSPL2-209ENST00000560620 A1L4Q6 167 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 AZIN1O14977 448 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 RGS14O43566 566 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 CDC40O60508 579 aaKnown RBP eCLIP12□□□□□ -0.49
CTDSPL2-209ENST00000560620 SEC22BO75396 215 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 CT62P0C5K7 136 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 MYZAPP0CAP1 466 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 DRD2P14416 443 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 CREB1P16220 341 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 NR0B1P51843 470 aaKnown RBP12□□□□□ -0.49
CTDSPL2-209ENST00000560620 PER3P56645 1201 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 RAE1P78406 368 aaKnown RBP12□□□□□ -0.49
CTDSPL2-209ENST00000560620 ZNF844Q08AG5 666 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 ZNF763Q0D2J5 394 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 EBPQ15125 230 aaKnown RBP12□□□□□ -0.49
CTDSPL2-209ENST00000560620 C4orf17Q53FE4 359 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 KRTCAP3Q53RY4 240 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 PIGGQ5H8A4 983 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 ZCCHC23Q6ZST2 131 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 FAM47EQ6ZV65 393 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 DDIASQ8IXT1 998 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 TAGAPQ8N103 731 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 POGLUT1Q8NBL1 392 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 ADCY4Q8NFM4 1077 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 OR5M3Q8NGP4 307 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 C16orf78Q8WTQ4 265 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 GPR137Q96N19 417 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 TMEM109Q9BVC6 243 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 WWTR1Q9GZV5 400 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 OR10A5Q9H207 317 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 TNFRSF12AQ9NP84 129 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 MIEF1Q9NQG6 463 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 SACM1LQ9NTJ5 587 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 CES1P1Q9UKY3 287 aa12□□□□□ -0.49
CTDSPL2-209ENST00000560620 DOPEY2Q9Y3R5 2298 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 A0A1B0GUH1 482 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 SERTM1A2A2V5 107 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 ACOT7O00154 380 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 SLC28A1O00337 649 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 CTIFO43310 598 aaKnown RBP11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 ASNA1O43681 348 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 HS6ST1O60243 411 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 ZNF354AO60765 605 aaPredicted RBP11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 ERLIN1O75477 346 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 RSL1D1O76021 490 aaKnown RBP11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 WISP2O76076 250 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 ATP1B1P05026 303 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 CHRNGP07510 517 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 LINC00032P0C843 101 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 NEFHP12036 1026 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 ABOP16442 354 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 NRG3P56975 720 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 C2orf80Q0P641 193 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 EXOSC7Q15024 291 aaKnown RBP11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 LTB4RQ15722 352 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 ARL13AQ5H913 290 aaPredicted RBP11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 FAM111BQ6SJ93 734 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 GK5Q6ZS86 529 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 TRIM46Q7Z4K8 759 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 CCDC116Q8IYX3 515 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 SAMD14Q8IZD0 417 aaPredicted RBP11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 GHDCQ8N2G8 530 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 SLC15A4Q8N697 577 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 OR2M7Q8NG81 312 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 OR7G1Q8NGA0 311 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 CNRIP1Q96F85 164 aaPredicted RBP11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 SGCZQ96LD1 299 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 KCNK9Q9NPC2 374 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 HEY2Q9UBP5 337 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 PTGDR2Q9Y5Y4 395 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 CROCCQ5TZA2 2017 aa11.99□□□□□ -0.49
CTDSPL2-209ENST00000560620 WDR91A4D1P6 747 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 FAM166BA8MTA8 275 aa11.98□□□□□ -0.49
CTDSPL2-209ENST00000560620 CAPN14A8MX76 684 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms