RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 DUSP2Q05923 314 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 MAP4K2Q12851 820 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 SLC13A2Q13183 592 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 EIF3IQ13347 325 aaKnown RBP8.08□□□□□ -1.12
TRAF3-209ENST00000560463 TRIP6Q15654 476 aaKnown RBP8.08□□□□□ -1.12
TRAF3-209ENST00000560463 VMACQ2NL98 169 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.08□□□□□ -1.12
TRAF3-209ENST00000560463 INTS11Q5TA45 600 aaKnown RBP8.08□□□□□ -1.12
TRAF3-209ENST00000560463 STPG1Q5TH74 334 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 CDCP2Q5VXM1 449 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 PWWP2BQ6NUJ5 590 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 ZCCHC12Q6PEW1 402 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 CEACAM20Q6UY09 585 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 QSOX2Q6ZRP7 698 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 B3GNT8Q7Z7M8 397 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 SPATA24Q86W54 205 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 RNF130Q86XS8 419 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 METTL25Q8N6Q8 603 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 BMPERQ8N8U9 685 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 C11orf65Q8NCR3 313 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 TMEM52Q8NDY8 209 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 OR5AK3PQ8NH89 298 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 MIPOL1Q8TD10 442 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 SLC26A7Q8TE54 656 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 COL26A1Q96A83 441 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 ANKRD9Q96BM1 317 aaPredicted RBP8.08□□□□□ -1.12
TRAF3-209ENST00000560463 CLIP3Q96DZ5 547 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 LIN37Q96GY3 246 aaPredicted RBP8.08□□□□□ -1.12
TRAF3-209ENST00000560463 SLC35G5Q96KT7 338 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 NSMCE2Q96MF7 247 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 LRFN5Q96NI6 719 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 ZPBPQ9BS86 351 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 ZCCHC3Q9NUD5 404 aaKnown RBP8.08□□□□□ -1.12
TRAF3-209ENST00000560463 FAM86C1Q9NVL1 165 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 GPATCH2Q9NW75 528 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 OCIAD1Q9NX40 245 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 DHCR7Q9UBM7 475 aaKnown RBP8.08□□□□□ -1.12
TRAF3-209ENST00000560463 EGFL7Q9UHF1 273 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 ZNF451Q9Y4E5 1061 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 TMEM184BQ9Y519 407 aaPredicted RBP8.08□□□□□ -1.12
TRAF3-209ENST00000560463 TMEM247A6NEH6 219 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 DUXAA6NLW8 204 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 ASNA1O43681 348 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 OR10H2O60403 315 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 B4GALT2O60909 372 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 TNFRSF21O75509 655 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 CREG1O75629 220 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 AGR2O95994 175 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 ALBP02768 609 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 CYC1P08574 325 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 ARAFP10398 606 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 PSMA4P25789 261 aaKnown RBP8.07□□□□□ -1.12
TRAF3-209ENST00000560463 RORAP35398 523 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 STT3AP46977 705 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 OR1D4P47884 311 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 KHKP50053 298 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 DSTNP60981 165 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 MAT1AQ00266 395 aaKnown RBP8.07□□□□□ -1.12
TRAF3-209ENST00000560463 INSM1Q01101 510 aaPredicted RBP8.07□□□□□ -1.12
TRAF3-209ENST00000560463 TP53BP2Q13625 1128 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 ELOAQ14241 798 aaKnown RBP8.07□□□□□ -1.12
TRAF3-209ENST00000560463 GNA13Q14344 377 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 ADRM1Q16186 407 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 SYT16Q17RD7 645 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 ZNF630Q2M218 657 aaPredicted RBP8.07□□□□□ -1.12
TRAF3-209ENST00000560463 PRICKLE4Q2TBC4 344 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 ZNF750Q32MQ0 723 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 ZNF628Q5EBL2 1059 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 GCNT6Q5T4J0 391 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 ARHGAP40Q5TG30 622 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 TMEM107Q6UX40 140 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 CYP2R1Q6VVX0 501 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 PTOV1Q86YD1 416 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 OR4N5Q8IXE1 308 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 ZZZ3Q8IYH5 903 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 EID3Q8N140 333 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 CACTIN-AS1Q8N1I8 211 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 CLEC4FQ8N1N0 589 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 OR2L13Q8N349 312 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 DTWD1Q8N5C7 304 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 METTL27Q8N6F8 245 aaPredicted RBP8.07□□□□□ -1.12
TRAF3-209ENST00000560463 ENDOVQ8N8Q3 282 aaKnown RBP8.07□□□□□ -1.12
TRAF3-209ENST00000560463 HIPK4Q8NE63 616 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 NUP43Q8NFH3 380 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 OR9A2Q8NGT5 310 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 PNPT1Q8TCS8 783 aaKnown RBP8.07□□□□□ -1.12
TRAF3-209ENST00000560463 RBM18Q96H35 190 aaKnown RBP8.07□□□□□ -1.12
TRAF3-209ENST00000560463 RSRC1Q96IZ7 334 aaKnown RBP8.07□□□□□ -1.12
TRAF3-209ENST00000560463 DGAT2Q96PD7 388 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 MS4A4EQ96PG1 132 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 DEPDC7Q96QD5 511 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 EFHD1Q9BUP0 239 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 YIPF2Q9BWQ6 316 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 ALOXE3Q9BYJ1 711 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 SLC26A1Q9H2B4 701 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 PIF1Q9H611 641 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 RNPEPL1Q9HAU8 725 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 LANCL2Q9NS86 450 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 OLAHQ9NV23 265 aa8.07□□□□□ -1.12
TRAF3-209ENST00000560463 C14orf105Q9NVL8 296 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms