RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 UCN2Q96RP3 112 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 NAP1L3Q99457 506 aaPredicted RBP11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 MED18Q9BUE0 208 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 G6PC3Q9BUM1 346 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 ANGPTL4Q9BY76 406 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 NT5DC2Q9H857 520 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 PLAC1Q9HBJ0 212 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 CLCF1Q9UBD9 225 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 FETUBQ9UGM5 382 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 PACSIN3Q9UKS6 424 aa11.65□□□□□ -0.54
RABGGTA-213ENST00000560127 ANKDD1BA6NHY2 528 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 TP53I11O14683 189 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 ACTL6AO96019 429 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 AHSGP02765 367 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 PTPN6P29350 595 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 CCKARP32238 428 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 GDF5P43026 501 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 MASP1P48740 699 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 PCYT1AP49585 367 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 ATP5J2P56134 94 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 MRPS25P82663 173 aaKnown RBP11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 PDAP1Q13442 181 aaKnown RBP11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 EBPQ15125 230 aaKnown RBP11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 C18orf21Q32NC0 220 aaPredicted RBP11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 C22orf34Q6ZV56 151 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 SLC29A4Q7RTT9 530 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 PACS2Q86VP3 889 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 KRT78Q8N1N4 520 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 SPPL2AQ8TCT8 520 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 TMEM171Q8WVE6 324 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 ART5Q96L15 291 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 SERPINB12Q96P63 405 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 ACBD3Q9H3P7 528 aa11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 RYDENQ9NUL5 291 aaKnown RBP11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 TEX10Q9NXF1 929 aaPredicted RBP11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 ZNF490Q9ULM2 529 aaPredicted RBP11.64□□□□□ -0.55
RABGGTA-213ENST00000560127 A0A1W2PNV4 684 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 H0Y3Z8 333 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 GOLGA8MH3BSY2 632 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 CDC7O00311 574 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 RTCAO00442 366 aaKnown RBP11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 GNB5O14775 395 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 MSTNO14793 375 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 TLX2O43763 284 aaPredicted RBP11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 CD5LO43866 347 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 PRAMEF4O60810 478 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 BANF1O75531 89 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 WDR47O94967 919 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 CLPSP04118 112 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 ATP5A1P25705 553 aaKnown RBP11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 HPDP32754 393 aaPredicted RBP11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 CD79BP40259 229 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 CASP3P42574 277 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 SLC6A12P48065 614 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 KCNC1P48547 511 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 SLC37A1P57057 533 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 HERVK_113P63132 956 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 ERVK-8P63133 956 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 EEF1A1P68104 462 aaKnown RBP11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 SRYQ05066 204 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 GAB1Q13480 694 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 EEF1A1P5Q5VTE0 462 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 PRAMEF9Q5VWM5 478 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 TIGD3Q6B0B8 471 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 ZNF474Q6S9Z5 364 aaPredicted RBP11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 RNF111Q6ZNA4 994 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 ZNF550Q7Z398 422 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 KLHL7Q8IXQ5 586 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 TAGAPQ8N103 731 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 ACOT4Q8N9L9 421 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 BBOF1Q8ND07 529 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 MCUQ8NE86 351 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 RBM18Q96H35 190 aaKnown RBP11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 PDLIM5Q96HC4 596 aaKnown RBP11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 TMEM41AQ96HV5 264 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 SIGLEC10Q96LC7 697 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 KCNC2Q96PR1 638 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 ERVK-6Q9BXR3 956 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 PITHD1Q9GZP4 211 aaPredicted RBP11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 CXorf56Q9H5V9 222 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 XAB2Q9HCS7 855 aaKnown RBP11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 YAE1D1Q9NRH1 226 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 ERVK-19Q9WJR5 959 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 TENM1Q9UKZ4 2725 aa11.63□□□□□ -0.55
RABGGTA-213ENST00000560127 GOLGA6L10A0A0M3HER8 536 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 IQANK1A0A1B0GTG1 560 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 DNALI1O14645 258 aaPredicted RBP11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 DYRK3O43781 588 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 CPN2P22792 545 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 UGT2B10P36537 528 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 PLIN5Q00G26 463 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 TGM3Q08188 693 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 ZNF267Q14586 743 aaPredicted RBP11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 CLEC12BQ2HXU8 276 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 KRTAP24-1Q3LI83 254 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 MSS51Q4VC12 460 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 VWA1Q6PCB0 445 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 C7orf57Q8NEG2 295 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 CTHRC1Q96CG8 243 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms