RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 MAPK1P28482 360 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 SOX11P35716 441 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 ASMTP46597 345 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 NME5P56597 212 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 PRR20EP86478 221 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 PRR20CP86479 221 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 PRR20DP86480 221 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 PRR20BP86481 221 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 PRR20AP86496 221 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 FUT7Q11130 342 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 MAP4K2Q12851 820 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 SF3A3Q12874 501 aaKnown RBP eCLIP8.42□□□□□ -1.06
HMG20A-209ENST00000559728 MAD2L1Q13257 205 aaPredicted RBP8.42□□□□□ -1.06
HMG20A-209ENST00000559728 PDCD4Q53EL6 469 aaKnown RBP8.42□□□□□ -1.06
HMG20A-209ENST00000559728 TRMT12Q53H54 448 aaKnown RBP8.42□□□□□ -1.06
HMG20A-209ENST00000559728 H3F3CQ6NXT2 135 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 FAM111BQ6SJ93 734 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 FUNDC1Q8IVP5 155 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 CCDC116Q8IYX3 515 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 ARMC10Q8N2F6 343 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 ZNF615Q8N8J6 731 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 EXD3Q8N9H8 876 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 ZSCAN1Q8NBB4 408 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 FDCSPQ8NFU4 85 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 CDC26Q8NHZ8 85 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 M1APQ8TC57 530 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 C10orf82Q8WW14 230 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 APOBEC4Q8WW27 367 aaKnown RBP8.42□□□□□ -1.06
HMG20A-209ENST00000559728 EXTL1Q92935 676 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 KLHL29Q96CT2 875 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 MTERF3Q96E29 417 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 CHMP6Q96FZ7 201 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 SENP5Q96HI0 755 aaPredicted RBP8.42□□□□□ -1.06
HMG20A-209ENST00000559728 FER1L6-AS2Q96M78 137 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 AMDHD1Q96NU7 426 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 CATSPER2Q96P56 530 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 LPAR4Q99677 370 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 NUDT9Q9BW91 350 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 CLMPQ9H6B4 373 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 ZNF552Q9H707 407 aaPredicted RBP8.42□□□□□ -1.06
HMG20A-209ENST00000559728 ANKRA2Q9H9E1 313 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 ZBTB20Q9HC78 741 aaPredicted RBP8.42□□□□□ -1.06
HMG20A-209ENST00000559728 MMP25Q9NPA2 562 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 TCF7L2Q9NQB0 619 aa8.42□□□□□ -1.06
HMG20A-209ENST00000559728 C19orf25Q9UFG5 118 aaPredicted RBP8.42□□□□□ -1.06
HMG20A-209ENST00000559728 EIF3LQ9Y262 564 aaKnown RBP8.42□□□□□ -1.06
HMG20A-209ENST00000559728 NUP210LQ5VU65 1888 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 UBDO15205 165 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 ZNF354AO60765 605 aaPredicted RBP8.41□□□□□ -1.06
HMG20A-209ENST00000559728 PSMG1O95456 288 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 IFNA16P05015 189 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 FBXO45P0C2W1 286 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 PCSK2P16519 638 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 EFNA1P20827 205 aaPredicted RBP8.41□□□□□ -1.06
HMG20A-209ENST00000559728 PRPS1L1P21108 318 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 PIK3R1P27986 724 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 SSTR4P31391 388 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 SLC37A1P57057 533 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 MRPS35P82673 323 aaKnown RBP8.41□□□□□ -1.06
HMG20A-209ENST00000559728 PLIN5Q00G26 463 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 ACTN3Q08043 901 aaPredicted RBP8.41□□□□□ -1.06
HMG20A-209ENST00000559728 AIMP2Q13155 320 aaKnown RBP8.41□□□□□ -1.06
HMG20A-209ENST00000559728 BIKQ13323 160 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 BTBD16Q32M84 506 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 SPANXN4Q5MJ08 99 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 B3GNTL1Q67FW5 361 aaPredicted RBP8.41□□□□□ -1.06
HMG20A-209ENST00000559728 NXNQ6DKJ4 435 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 BORAQ6PGQ7 559 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 PAOXQ6QHF9 649 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 ZNF551Q7Z340 670 aaPredicted RBP8.41□□□□□ -1.06
HMG20A-209ENST00000559728 C9orf40Q8IXQ3 194 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 LRRC25Q8N386 305 aaPredicted RBP8.41□□□□□ -1.06
HMG20A-209ENST00000559728 GALNT16Q8N428 558 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 MORN4Q8NDC4 146 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 B3GNT7Q8NFL0 401 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 ADCY4Q8NFM4 1077 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 OR7G2Q8NG99 324 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 OR9I1Q8NGQ6 314 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 OR1N1Q8NGS0 311 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 OR9A2Q8NGT5 310 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 OR14A16Q8NHC5 309 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 SLC2A12Q8TD20 617 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 ZNF675Q8TD23 568 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 BRIX1Q8TDN6 353 aaKnown RBP8.41□□□□□ -1.06
HMG20A-209ENST00000559728 NCLNQ969V3 563 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 TESCQ96BS2 214 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 PPCDCQ96CD2 204 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 FBXL20Q96IG2 436 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 DGAT2Q96PD7 388 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 SIKE1Q9BRV8 207 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 TMEM120AQ9BXJ8 343 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 ATP13A2Q9NQ11 1180 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 SIRT3Q9NTG7 399 aaPredicted RBP8.41□□□□□ -1.06
HMG20A-209ENST00000559728 KLHL14Q9P2G3 628 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 G3BP2Q9UN86 482 aaKnown RBP8.41□□□□□ -1.06
HMG20A-209ENST00000559728 DTX4Q9Y2E6 619 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 COPG1Q9Y678 874 aaKnown RBP8.41□□□□□ -1.06
HMG20A-209ENST00000559728 NBEAQ8NFP9 2946 aa8.41□□□□□ -1.06
HMG20A-209ENST00000559728 SMG1Q96Q15 3661 aaKnown RBP8.4□□□□□ -1.06
HMG20A-209ENST00000559728 A0A0G2JND7 137 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms