RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 RNF111Q6ZNA4 994 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 IKBIPQ70UQ0 350 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 TICAM1Q8IUC6 712 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 SAMD14Q8IZD0 417 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-205ENST00000558428 FNDC5Q8NAU1 212 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 OR5L2Q8NGL0 311 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 OR8K3Q8NH51 312 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 SUN3Q8TAQ9 357 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMAD3-205ENST00000558428 GFM2Q969S9 779 aaKnown RBP11.48□□□□□ -0.57
SMAD3-205ENST00000558428 TUBGCP3Q96CW5 907 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 EGLN2Q96KS0 407 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 PPP1R36Q96LQ0 422 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 TSSK3Q96PN8 268 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 TRIM4Q9C037 500 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 BRINP2Q9C0B6 783 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 MANSC1Q9H8J5 431 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 SLC35C2Q9NQQ7 365 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 PNPOQ9NVS9 261 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMAD3-205ENST00000558428 THAP1Q9NVV9 213 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 MYOTQ9UBF9 498 aa11.48□□□□□ -0.57
SMAD3-205ENST00000558428 SHANK1Q9Y566 2161 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 TMEM200CA6NKL6 621 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 WWP2O00308 870 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 SNNO75324 88 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-205ENST00000558428 ATP1B1P05026 303 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 BCKDHAP12694 445 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 PLA2G2AP14555 144 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 SSTR4P31391 388 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 PTGER1P34995 402 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 CD96P40200 585 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 SSR4P51571 173 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 HK2P52789 917 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 SLC37A1P57057 533 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 OR1C1Q15619 314 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 LTB4RQ15722 352 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 PRICKLE4Q2TBC4 344 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 C6orf136Q5SQH8 315 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF468Q5VIY5 522 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-205ENST00000558428 C16orf47Q6ZP98 133 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-205ENST00000558428 SLC29A4Q7RTT9 530 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 C9orf40Q8IXQ3 194 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 CCDC116Q8IYX3 515 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 ARMC10Q8N2F6 343 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 VWA5B2Q8N398 1253 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 TMEM156Q8N614 296 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 HORMAD2Q8N7B1 307 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 ADCY4Q8NFM4 1077 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 CLHC1Q8NHS4 586 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 CPT1CQ8TCG5 803 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF681Q96N22 645 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 SIGLEC12Q96PQ1 595 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 BBS4Q96RK4 519 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 GAL3ST4Q96RP7 486 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 C1orf50Q9BV19 199 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 LRFN1Q9P244 771 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 MAP10Q9P2G4 905 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 BAIAP2L1Q9UHR4 511 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 YARS2Q9Y2Z4 477 aaKnown RBP11.47□□□□□ -0.57
SMAD3-205ENST00000558428 PCDHGA10Q9Y5H3 936 aa11.47□□□□□ -0.57
SMAD3-205ENST00000558428 OR6C76A6NM76 312 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 CDK2AP1O14519 115 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 AKAP10O43572 662 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 PRAMEF2O60811 474 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 OR2J2O76002 312 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 LRATO95237 230 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 CLPSP04118 112 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 KITP10721 976 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 NTSP30990 170 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 TRHRP34981 398 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-205ENST00000558428 ASMTP46597 345 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 CYB561P49447 251 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 HLCSP50747 726 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 PPP2R2AP63151 447 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 FUT7Q11130 342 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 INPP5JQ15735 1006 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-205ENST00000558428 PRR30Q53SZ7 412 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF766Q5HY98 468 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 SPINK14Q6IE38 97 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 FAM111BQ6SJ93 734 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 FAM9CQ8IZT9 166 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 LIX1Q8N485 282 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 CISD2Q8N5K1 135 aaKnown RBP11.46□□□□□ -0.57
SMAD3-205ENST00000558428 NUBPLQ8TB37 319 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 DYDC1Q8WWB3 177 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 ASB15Q8WXK1 588 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF75CPQ92670 426 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-205ENST00000558428 RASL10BQ96S79 203 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 NUF2Q9BZD4 464 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 OR10A5Q9H207 317 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF446Q9NWS9 450 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 MAT2BQ9NZL9 334 aa11.46□□□□□ -0.57
SMAD3-205ENST00000558428 MARCOQ9UEW3 520 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-205ENST00000558428 EXO1Q9UQ84 846 aaKnown RBP11.46□□□□□ -0.57
SMAD3-205ENST00000558428 NUP214P35658 2090 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-205ENST00000558428 EML6Q6ZMW3 1958 aa11.46□□□□□ -0.58
SMAD3-205ENST00000558428 A8MVJ9 347 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 KLF11O14901 512 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 PRPS2P11908 318 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms