RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 MRPL14Q6P1L8 145 aaKnown RBP15.8■□□□□ 0.12
SNX1-203ENST00000558040 TMEM107Q6UX40 140 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 ANGPTL8Q6UXH0 198 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 ZNF517Q6ZMY9 492 aaPredicted RBP15.8■□□□□ 0.12
SNX1-203ENST00000558040 SZRD1Q7Z422 152 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 PRSS58Q8IYP2 241 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 ULK2Q8IYT8 1036 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 ESX1Q8N693 406 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 PLPP5Q8NEB5 264 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 OR5AK3PQ8NH89 298 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 ELP4Q96EB1 424 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 AURKBQ96GD4 344 aaPredicted RBP15.8■□□□□ 0.12
SNX1-203ENST00000558040 ECSITQ9BQ95 431 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 VN1R1Q9GZP7 353 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 CHST8Q9H2A9 424 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 NECTIN3Q9NQS3 549 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 ZCCHC3Q9NUD5 404 aaKnown RBP15.8■□□□□ 0.12
SNX1-203ENST00000558040 CMTM6Q9NX76 183 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 DLL3Q9NYJ7 618 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 RIF1Q5UIP0 2472 aaKnown RBP15.79■□□□□ 0.12
SNX1-203ENST00000558040 A0A087WV62 115 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 ANKRD65E5RJM6 399 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 TGFBR3LH3BV60 316 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 NME4O00746 187 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 CD82P27701 267 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 MC3RP41968 323 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 NCF4Q15080 339 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 LTB4RQ15722 352 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 NSDHLQ15738 373 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 ZNF628Q5EBL2 1059 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 PIGGQ5H8A4 983 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 SAXO2Q658L1 398 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 LCN10Q6JVE6 187 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 FAM198BQ6UWH4 519 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 GALNT12Q8IXK2 581 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 FBXW8Q8N3Y1 598 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 ADCY4Q8NFM4 1077 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 METTL21AQ8WXB1 218 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 RIT1Q92963 219 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 NEURL3Q96EH8 262 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 FAM120BQ96EK7 910 aaKnown RBP15.79■□□□□ 0.12
SNX1-203ENST00000558040 ZNF578Q96N58 590 aaPredicted RBP15.79■□□□□ 0.12
SNX1-203ENST00000558040 TRIM4Q9C037 500 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 SOX17Q9H6I2 414 aaPredicted RBP15.79■□□□□ 0.12
SNX1-203ENST00000558040 DDX18Q9NVP1 670 aaKnown RBP15.79■□□□□ 0.12
SNX1-203ENST00000558040 FOXJ2Q9P0K8 574 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 ACSL6Q9UKU0 697 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 PADI2Q9Y2J8 665 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 CLDN16Q9Y5I7 305 aa15.79■□□□□ 0.12
SNX1-203ENST00000558040 MYOCOSA0A1B0GUC4 107 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 TCRBV16S1A1N1A0A5B0 115 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 OR2W5A6NFC9 320 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 IDSB3KWA1 339 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 CIB2O75838 187 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 RECKO95980 971 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 GPX2P18283 190 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 TNNI3P19429 210 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 ME2P23368 584 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 SLC5A2P31639 672 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 MAGEA8P43361 318 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 ANXA11P50995 505 aaKnown RBP15.78■□□□□ 0.12
SNX1-203ENST00000558040 EMP2P54851 167 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 TXNL4AP83876 142 aaKnown RBP15.78■□□□□ 0.12
SNX1-203ENST00000558040 LIPEQ05469 1076 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 MAP4K2Q12851 820 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 FADDQ13158 208 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 TP53BP2Q13625 1128 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 SELPLGQ14242 412 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 PRICKLE4Q2TBC4 344 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 SHISA6Q6ZSJ9 500 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 VWA5B2Q8N398 1253 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 TNIP2Q8NFZ5 429 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 OR52N2Q8NGI0 321 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 KAT2AQ92830 837 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 TSLPQ969D9 159 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 PPWD1Q96BP3 646 aaKnown RBP15.78■□□□□ 0.12
SNX1-203ENST00000558040 MAGED4Q96JG8 741 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 CLPTM1LQ96KA5 538 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 SPSB2Q99619 263 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 CRB3Q9BUF7 120 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 SPATA9Q9BWV2 254 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 TRIM8Q9BZR9 551 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 SPRY4Q9C004 299 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 ALG2Q9H553 416 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 KAT8Q9H7Z6 458 aaKnown RBP15.78■□□□□ 0.12
SNX1-203ENST00000558040 CXorf21Q9HAI6 301 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 ADAP2Q9NPF8 381 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 MAT2BQ9NZL9 334 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 NTMQ9P121 344 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 C3orf18Q9UK00 162 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 FER1L5A0AVI2 2057 aa15.78■□□□□ 0.12
SNX1-203ENST00000558040 TEX51A0A1B0GUA7 166 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 STMND1H3BQB6 276 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 PCDH17O14917 1159 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 PLOD3O60568 738 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 COQ9O75208 318 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 ALOX12BO75342 701 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 BCAS2O75934 225 aaPredicted RBP15.77■□□□□ 0.12
SNX1-203ENST00000558040 PDE5AO76074 875 aa15.77■□□□□ 0.12
SNX1-203ENST00000558040 RAB40ALP0C0E4 278 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms