RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 NDUFAF5Q5TEU4 345 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 FAM205BPQ63HN1 556 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 NIPAL1Q6NVV3 410 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 AGTRAPQ6RW13 159 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 LCTLQ6UWM7 567 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 IL20RBQ6UXL0 311 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 FRMD7Q6ZUT3 714 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 SEM1Q6ZVN7 128 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 CCDC91Q7Z6B0 441 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 GAS2L3Q86XJ1 694 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 DENND6AQ8IWF6 608 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 GPALPP1Q8IXQ4 340 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 CA13Q8N1Q1 262 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 FAM109AQ8N4B1 249 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 ZNF610Q8N9Z0 462 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 ABHD11Q8NFV4 315 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 OR4K1Q8NGD4 311 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 NT5CQ8TCD5 201 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 IPCEF1Q8WWN9 437 aaPredicted RBP5.4□□□□□ -1.54
VPS33B-207ENST00000557470 ASB15Q8WXK1 588 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 PYCR2Q96C36 320 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 APIPQ96GX9 242 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 HES6Q96HZ4 224 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 RADILQ96JH8 1075 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 OR4K3Q96R72 315 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 RASL10BQ96S79 203 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 BAG1Q99933 345 aaPredicted RBP5.4□□□□□ -1.54
VPS33B-207ENST00000557470 FAM173AQ9BQD7 235 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 CCDC77Q9BR77 488 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 FAM167BQ9BTA0 163 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 SORBS1Q9BX66 1292 aaKnown RBP5.4□□□□□ -1.54
VPS33B-207ENST00000557470 FRMD8P1Q9BZ68 369 aaPredicted RBP5.4□□□□□ -1.54
VPS33B-207ENST00000557470 AICDAQ9GZX7 198 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 KLHL31Q9H511 634 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 PLEKHF2Q9H8W4 249 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 IL1RL2Q9HB29 575 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 FBXO6Q9NRD1 293 aaPredicted RBP5.4□□□□□ -1.54
VPS33B-207ENST00000557470 INTS10Q9NVR2 710 aaKnown RBP5.4□□□□□ -1.54
VPS33B-207ENST00000557470 SPRR3Q9UBC9 169 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 MYOTQ9UBF9 498 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 B4GALT7Q9UBV7 327 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 DHRS7Q9Y394 339 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 CLDN16Q9Y5I7 305 aa5.4□□□□□ -1.54
VPS33B-207ENST00000557470 EPN1Q9Y6I3 576 aaPredicted RBP5.4□□□□□ -1.54
VPS33B-207ENST00000557470 HIVEP2P31629 2446 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 TCRBV7S3A2A0A539 114 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 HSPB2A8KAH6 182 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 KDM4EB2RXH2 506 aaPredicted RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 B9A039 149 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 FAM47E-STBD1D6RA91 191 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 AP3B1O00203 1094 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 AVILO75366 819 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 ZFAND5O76080 213 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 LY6G6DO95868 133 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 C8GP07360 202 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 CCL3P10147 92 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 PAMP19021 973 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 CNR1P21554 472 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 BMP5P22003 454 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 PCSK6P29122 969 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 SLC1A2P43004 574 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 HSPA7P48741 367 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 DNASE1L1P49184 302 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 ALDH9A1P49189 494 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 ASCL1P50553 236 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 HNRNPFP52597 415 aaKnown RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 HK2P52789 917 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 WNT3P56703 355 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 NKX6-1P78426 367 aaPredicted RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 SARNPP82979 210 aaKnown RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 TIAL1Q01085 375 aaKnown RBP eCLIP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 SRSF2Q01130 221 aaKnown RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 SP140Q13342 867 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 DHX34Q14147 1143 aaKnown RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 SLC10A1Q14973 349 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 DAZAP2Q15038 168 aaPredicted RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 PDCD1Q15116 288 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 HSPB2Q16082 182 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 PFKFB4Q16877 469 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 HYAL4Q2M3T9 481 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 TOR2AQ5JU69 321 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 CATSPEREQ5SY80 951 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 WLSQ5T9L3 541 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 SEL1L2Q5TEA6 688 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 HECTD2Q5U5R9 776 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 RAD9BQ6WBX8 426 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 RTL4Q6ZR62 310 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 FAM47EQ6ZV65 393 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 CXXC5Q7LFL8 322 aaKnown RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 CLNKQ7Z7G1 428 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 SLC13A5Q86YT5 568 aaPredicted RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 ZDHHC13Q8IUH4 622 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 MRPL41Q8IXM3 137 aaKnown RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 PPIL6Q8IXY8 311 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 ULK2Q8IYT8 1036 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 SYCE1Q8N0S2 351 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 ANKRD53Q8N9V6 530 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 ATG16L2Q8NAA4 619 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 RNF214Q8ND24 703 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 TMEM52Q8NDY8 209 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms