RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 CCDC159P0C7I6 412 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 UROSP10746 265 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 SLC2A3P11169 496 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 ACP5P13686 325 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 KCNA5P22460 613 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 CRHBPP24387 322 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 YWHAQP27348 245 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 OXTRP30559 389 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 CCKBRP32239 447 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 SUOXP51687 545 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 POLR2JP52435 117 aaKnown RBP4.48□□□□□ -1.69
ATXN3-246ENST00000557030 HNRNPFP52597 415 aaKnown RBP4.48□□□□□ -1.69
ATXN3-246ENST00000557030 RAD23AP54725 363 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 ARSFP54793 590 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 MAP3K7CLP57077 242 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 TMPRSS3P57727 454 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 ERVK-8P63133 956 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 TLE2Q04725 743 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 PRKG2Q13237 762 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 ITGADQ13349 1161 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 ALKBH1Q13686 389 aaKnown RBP4.48□□□□□ -1.69
ATXN3-246ENST00000557030 BCL2A1Q16548 175 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 SMU1Q2TAY7 513 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 C6orf141Q5SZD1 244 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 C1QTNF12Q5T7M4 302 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 FAM171A1Q5VUB5 890 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 AGAP7PQ5VUJ5 663 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 WSCD1Q658N2 575 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 CLEC6AQ6EIG7 209 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 XAF1Q6GPH4 301 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 TMEM53Q6P2H8 277 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 KDELC1Q6UW63 502 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 C17orf99Q6UX52 265 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 PRSS48Q7RTY5 328 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 ARHGAP12Q8IWW6 846 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 RIMKLAQ8IXN7 391 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 CLEC4FQ8N1N0 589 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 SPATA6LQ8N4H0 392 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 ESX1Q8N693 406 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 PTGR2Q8N8N7 351 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-246ENST00000557030 OR8J3Q8NGG0 315 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 OR56A4Q8NGH8 313 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 OR52E4Q8NGH9 312 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 OR9I1Q8NGQ6 314 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 SPATA22Q8NHS9 363 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 ITFG1Q8TB96 612 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 TANKQ92844 425 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 BIRC7Q96CA5 298 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 TUBGCP3Q96CW5 907 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 MOCOSQ96EN8 888 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 SMARCD1Q96GM5 515 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 SH3YL1Q96HL8 342 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-246ENST00000557030 CELF6Q96J87 481 aaKnown RBP4.48□□□□□ -1.69
ATXN3-246ENST00000557030 RNF145Q96MT1 663 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 CCDC115Q96NT0 180 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 CGREF1Q99674 301 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 RBM4BQ9BQ04 359 aaKnown RBP4.48□□□□□ -1.69
ATXN3-246ENST00000557030 SLC39A3Q9BRY0 314 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 HERC2P3Q9BVR0 1158 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 RBM4Q9BWF3 364 aaKnown RBP4.48□□□□□ -1.69
ATXN3-246ENST00000557030 CHID1Q9BWS9 393 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 ADNPQ9H2P0 1102 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 RMND5AQ9H871 391 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 IL1RL2Q9HB29 575 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 TMEM165Q9HC07 324 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 SYTL2Q9HCH5 934 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 FBRSL1Q9HCM7 1045 aaKnown RBP4.48□□□□□ -1.69
ATXN3-246ENST00000557030 MID1IP1Q9NPA3 183 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 CCNB1IP1Q9NPC3 277 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 WASH6PQ9NQA3 447 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 FBXO8Q9NRD0 319 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 RGS18Q9NS28 235 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 TMLHEQ9NVH6 421 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 RBM22Q9NW64 420 aaKnown RBP eCLIP4.48□□□□□ -1.69
ATXN3-246ENST00000557030 OSER1Q9NX31 292 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 MIOSQ9NXC5 875 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 CACNG4Q9UBN1 327 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 POLG2Q9UHN1 485 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 C3orf18Q9UK00 162 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 CDH9Q9ULB4 789 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 PDE10AQ9Y233 779 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 PIN4Q9Y237 131 aaKnown RBP4.48□□□□□ -1.69
ATXN3-246ENST00000557030 Q9Y3F1 56 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 NAALAD2Q9Y3Q0 740 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 PCDHGB1Q9Y5G3 927 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 DNAJC15Q9Y5T4 150 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 CPQQ9Y646 472 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 HSPE1-MOB4S4R3N1 261 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 HTTP42858 3142 aa4.48□□□□□ -1.69
ATXN3-246ENST00000557030 TRIP12Q14669 1992 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 COL6A3P12111 3177 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 DOCK3Q8IZD9 2030 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ATP6AP2A0A1C7CYW4 349 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 FAM90A8PA6NJQ4 464 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 ZNF99A8MXY4 864 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 SUPT3HB4E1H0 165 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 HHLA1C9JL84 531 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 G3V2T6 193 aa4.47□□□□□ -1.69
ATXN3-246ENST00000557030 I6L893 689 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-246ENST00000557030 J3QRK9 145 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms