RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 KLK1P06870 262 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 GSTP1P09211 210 aaKnown RBP6.79□□□□□ -1.32
SCFD1-222ENST00000556768 SLC35E2P0CK97 266 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 RNF224P0DH78 156 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 SERPINB3P29508 390 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 PTGS2P35354 604 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 MAGEA12P43365 314 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 CCT5P48643 541 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 KRT6CP48668 564 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 MAPK12P53778 367 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 NRG3P56975 720 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 GPR85P60893 370 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 HERVK_113P63132 956 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 ASPHQ12797 758 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 SLC29A2Q14542 456 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 SGO1Q5FBB7 561 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 NDUFAF5Q5TEU4 345 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 C18orf63Q68DL7 685 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 SP5Q6BEB4 398 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-222ENST00000556768 OR52E8Q6IFG1 317 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 RNF111Q6ZNA4 994 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 TIFABQ6ZNK6 161 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 RTL4Q6ZR62 310 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 FAM47EQ6ZV65 393 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 MDGA2Q7Z553 956 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 SLC22A9Q8IVM8 553 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 TAGAPQ8N103 731 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 RNF175Q8N4F7 328 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 SLC15A4Q8N697 577 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 MYRIPQ8NFW9 859 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 OR4K14Q8NGD5 310 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 OR52B6Q8NGF0 335 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 C16orf52Q8NHV5 167 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 NUBPLQ8TB37 319 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 WDR20Q8TBZ3 569 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 ACMSDQ8TDX5 336 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 TRPC4APQ8TEL6 797 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 SELENOMQ8WWX9 145 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 ANKRD9Q96BM1 317 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-222ENST00000556768 PPWD1Q96BP3 646 aaKnown RBP6.79□□□□□ -1.32
SCFD1-222ENST00000556768 CCDC126Q96EE4 140 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 CNPPD1Q9BV87 410 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 SORBS1Q9BX66 1292 aaKnown RBP6.79□□□□□ -1.32
SCFD1-222ENST00000556768 ERVK-6Q9BXR3 956 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 LIN28AQ9H9Z2 209 aaKnown RBP6.79□□□□□ -1.32
SCFD1-222ENST00000556768 BRF2Q9HAW0 419 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 SACM1LQ9NTJ5 587 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 COQ3Q9NZJ6 369 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 PSMC3IPQ9P2W1 217 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-222ENST00000556768 FETUBQ9UGM5 382 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 DCDC2Q9UHG0 476 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 TINAGQ9UJW2 476 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 ADAM29Q9UKF5 820 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 SLC12A4Q9UP95 1085 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 STK38LQ9Y2H1 464 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 CLDN16Q9Y5I7 305 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 KLF2Q9Y5W3 355 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-222ENST00000556768 HIVEP3Q5T1R4 2406 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 ICE1Q9Y2F5 2266 aa6.79□□□□□ -1.32
SCFD1-222ENST00000556768 SLC35F4A4IF30 521 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 GLOD5A6NK44 160 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 OR6C76A6NM76 312 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 OR7A17O14581 309 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ULK1O75385 1050 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 EEDO75530 441 aaKnown RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 OR6B1O95007 311 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ETHE1O95571 254 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 GBAP04062 536 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 GSTA1P08263 222 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 AGAP20933 346 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 CNR1P21554 472 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 COL8A1P27658 744 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ECHS1P30084 290 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 GALNSP34059 522 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 BSGP35613 385 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 SOX3P41225 446 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 HK2P52789 917 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 NAA20P61599 178 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 PPIAP62937 165 aaKnown RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ZNF267Q14586 743 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 RASA2Q15283 850 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 C3AR1Q16581 482 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 GGTA1PQ4G0N0 100 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 SLC22A10Q63ZE4 541 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 HIST2H2BCQ6DN03 193 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 EIF1ADQ8N9N8 165 aaKnown RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ZFP62Q8NB50 900 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 OR4F6Q8NGB9 312 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 AGAP11Q8TF27 550 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 CCDC120Q96HB5 630 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 GAL3ST4Q96RP7 486 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 FAM173AQ9BQD7 235 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 FAIM2Q9BWQ8 316 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 PPCSQ9HAB8 311 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 VPS29Q9UBQ0 182 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ZNF223Q9UK11 482 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ENTPD4Q9Y227 616 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 CFL2Q9Y281 166 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 ASB4Q9Y574 426 aa6.78□□□□□ -1.32
SCFD1-222ENST00000556768 CORINQ9Y5Q5 1042 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms