RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 TEX35Q5T0J7 233 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 TRIM65Q6PJ69 517 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 FAM159AQ6UWV7 190 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 GDPGP1Q6ZNW5 385 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 FAM71CQ8NEG0 241 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 FBXO25Q8TCJ0 367 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 SPPL2AQ8TCT8 520 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 NLNQ9BYT8 704 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 NMNAT2Q9BZQ4 307 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 DCTPP1Q9H773 170 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 SP140LQ9H930 580 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 LIN28AQ9H9Z2 209 aaKnown RBP4.47□□□□□ -1.69
VRK1-205ENST00000555402 ROPN1Q9HAT0 212 aaPredicted RBP4.47□□□□□ -1.69
VRK1-205ENST00000555402 POLE3Q9NRF9 147 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 NUDT4Q9NZJ9 180 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 BCAP29Q9UHQ4 241 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 NIP7Q9Y221 180 aaKnown RBP eCLIP4.47□□□□□ -1.69
VRK1-205ENST00000555402 ZNF175Q9Y473 711 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 RAD54L2Q9Y4B4 1467 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 IGHV3-38A0A0C4DH36 116 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 A0A1B0GU03 582 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 IGLON5A6NGN9 336 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 FBP2O00757 339 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 ADAM12O43184 909 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 ARHGEF9O43307 516 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 IDH3BO43837 385 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 TSPAN2O60636 221 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 SCGB2A1O75556 95 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 IFNB1P01574 187 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 TRIM49P0CI25 452 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 TRIM49CP0CI26 452 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 PRDX2P32119 198 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 MATKP42679 507 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 MAGEA4P43358 317 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 SLC6A8P48029 635 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 NDST1P52848 882 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 GSCP56915 257 aaPredicted RBP4.46□□□□□ -1.7
VRK1-205ENST00000555402 PRKCEQ02156 737 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 PDIA5Q14554 519 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 MS4A18Q3C1V0 323 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 C14orf177Q52M58 125 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 ZFAND4Q86XD8 727 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 TEX9Q8N6V9 391 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 BANPQ8N9N5 519 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 ZBTB44Q8NCP5 570 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 DQX1Q8TE96 717 aaKnown RBP4.46□□□□□ -1.7
VRK1-205ENST00000555402 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.46□□□□□ -1.7
VRK1-205ENST00000555402 SELENOMQ8WWX9 145 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 P3H4Q92791 437 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 ACCSQ96QU6 501 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 OPRPNQ99935 248 aaPredicted RBP4.46□□□□□ -1.7
VRK1-205ENST00000555402 FGFBP2Q9BYJ0 223 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 STRADBQ9C0K7 418 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 FAM124BQ9H5Z6 455 aaPredicted RBP4.46□□□□□ -1.7
VRK1-205ENST00000555402 ZDHHC18Q9NUE0 388 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 ANKMY1Q9P2S6 941 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 AFF2P51816 1311 aa4.46□□□□□ -1.7
VRK1-205ENST00000555402 ZNF724A8MTY0 619 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 LGALS8O00214 317 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 PDHXO00330 501 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 GUCA1CO95843 209 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 FUT1P19526 365 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 SLC1A6P48664 564 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 NOVP48745 357 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 FKBP3Q00688 224 aaKnown RBP4.45□□□□□ -1.7
VRK1-205ENST00000555402 CALCOCO2Q13137 446 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 FASTKQ14296 549 aaKnown RBP4.45□□□□□ -1.7
VRK1-205ENST00000555402 EMC2Q15006 297 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 HKDC1Q2TB90 917 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 PYROXD2Q8N2H3 581 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 CHDHQ8NE62 594 aaPredicted RBP4.45□□□□□ -1.7
VRK1-205ENST00000555402 RCHY1Q96PM5 261 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 YAE1D1Q9NRH1 226 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 DEPPQ9NTK1 212 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 MIOXQ9UGB7 285 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 SH3BGRL2Q9UJC5 107 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 SLC9A8Q9Y2E8 581 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 AUP1Q9Y679 476 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 AP1M2Q9Y6Q5 423 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 TP53BP1Q12888 1972 aaPredicted RBP4.45□□□□□ -1.7
VRK1-205ENST00000555402 ABCC4O15439 1325 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 ZMYM6O95789 1325 aa4.45□□□□□ -1.7
VRK1-205ENST00000555402 MEX3AA1L020 520 aaKnown RBP4.44□□□□□ -1.7
VRK1-205ENST00000555402 ASB14A6NK59 587 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 K7EPI3 171 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 K7ERI5 159 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 SMPD2O60906 423 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 HEXBP07686 556 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 RRASP10301 218 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 ZNF10P21506 573 aaPredicted RBP4.44□□□□□ -1.7
VRK1-205ENST00000555402 UGT1A4P22310 534 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 CALML3P27482 149 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 OXTRP30559 389 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 SCGB2A2Q13296 93 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 SHROOM1Q2M3G4 852 aaPredicted RBP4.44□□□□□ -1.7
VRK1-205ENST00000555402 ZNF528Q3MIS6 628 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 DPY19L2P2Q6ZN68 376 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 GPBP1Q86WP2 473 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 WDSUB1Q8N9V3 476 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 OR52B4Q8NGK2 314 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms