RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 SLC22A16Q86VW1 577 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 AMZ2Q86W34 360 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 C17orf64Q86WR6 236 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 ZNF440Q8IYI8 595 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 RNF148Q8N7C7 305 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 ZNRF1Q8ND25 227 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 ICA1LQ8NDH6 482 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 OR52B4Q8NGK2 314 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 OR6F1Q8NGZ6 308 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.57□□□□□ -2
SCFD1-213ENST00000554776 PCNPQ8WW12 178 aaKnown RBP2.57□□□□□ -2
SCFD1-213ENST00000554776 TMEM37Q8WXS4 190 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 ACCSQ96QU6 501 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 ATOH8Q96SQ7 321 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 IWS1Q96ST2 819 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 KCNK16Q96T55 309 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 RBM4BQ9BQ04 359 aaKnown RBP2.57□□□□□ -2
SCFD1-213ENST00000554776 FTHL17Q9BXU8 183 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 TRIM15Q9C019 465 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 CCSER1Q9C0I3 900 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 NACA2Q9H009 215 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 DPH5Q9H2P9 285 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 DCTPP1Q9H773 170 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 ACTR8Q9H981 624 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 LHX3Q9UBR4 397 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 ZNF175Q9Y473 711 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 SALL1Q9NSC2 1324 aa2.57□□□□□ -2
SCFD1-213ENST00000554776 LOC105371242A0A075B767 164 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 IGKV3D-20A0A0C4DH25 116 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 IQCMA0A1B0GVH7 501 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 IGLON5A6NGN9 336 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 ARHGEF33A8MVX0 844 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 TFECO14948 347 aaPredicted RBP2.56□□□□□ -2
SCFD1-213ENST00000554776 IDH3BO43837 385 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 SSX5O60225 188 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 SNAP91O60641 907 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 CRLF1O75462 422 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 SCGB2A1O75556 95 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 HPRP00739 348 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 OAS1P00973 400 aaKnown RBP2.56□□□□□ -2
SCFD1-213ENST00000554776 OR9G9P0C7N8 305 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 ARF4P18085 180 aaPredicted RBP2.56□□□□□ -2
SCFD1-213ENST00000554776 TSPAN8P19075 237 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 DNAJB1P25685 340 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 TMOD1P28289 359 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 PPP2R1AP30153 589 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 OXTRP30559 389 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 RPL9P32969 192 aaKnown RBP2.56□□□□□ -2
SCFD1-213ENST00000554776 ALDH3B1P43353 468 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 ZFP36L2P47974 494 aaKnown RBP2.56□□□□□ -2
SCFD1-213ENST00000554776 NDUFV3P56181 108 aaKnown RBP2.56□□□□□ -2
SCFD1-213ENST00000554776 TMEM50BP56557 158 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 ERVK-16P61578 105 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 CD300CQ08708 224 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 KLHL30Q0D2K2 578 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 PDIA5Q14554 519 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 ZNF146Q15072 292 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 UPP1Q16831 310 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 UNC50Q53HI1 259 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 TEX35Q5T0J7 233 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 C12orf60Q5U649 245 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 METTL7BQ6UX53 244 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 FAM43BQ6ZT52 329 aaPredicted RBP2.56□□□□□ -2
SCFD1-213ENST00000554776 ASRGL1Q7L266 308 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 LRRTM1Q86UE6 522 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 ERC1Q8IUD2 1116 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 CCDC71Q8IV32 467 aaPredicted RBP2.56□□□□□ -2
SCFD1-213ENST00000554776 BANPQ8N9N5 519 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 Q8NBF4 154 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 MINDY2Q8NBR6 621 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 PRSS33Q8NF86 280 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 OR4F5Q8NH21 305 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 GOLGA5Q8TBA6 731 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 SPPL2AQ8TCT8 520 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 CHPT1Q8WUD6 406 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 MCHR2Q969V1 340 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 NABP1Q96AH0 204 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 C16orf45Q96MC5 204 aaPredicted RBP2.56□□□□□ -2
SCFD1-213ENST00000554776 PRICKLE1Q96MT3 831 aaPredicted RBP2.56□□□□□ -2
SCFD1-213ENST00000554776 RCHY1Q96PM5 261 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 DCTN5Q9BTE1 182 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 CABLES2Q9BTV7 478 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 NT5DC2Q9H857 520 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 ADGRL4Q9HBW9 690 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 NRN1Q9NPD7 142 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 DEPPQ9NTK1 212 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 PAK5Q9P286 719 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 EIF3KQ9UBQ5 218 aaKnown RBP2.56□□□□□ -2
SCFD1-213ENST00000554776 MIOXQ9UGB7 285 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 FBXO7Q9Y3I1 522 aa2.56□□□□□ -2
SCFD1-213ENST00000554776 TRGV8A0A0C4DH27 118 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 EPM2AB3EWF7 344 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 TDRD15B5MCY1 1934 aaKnown RBP2.55□□□□□ -2
SCFD1-213ENST00000554776 LANCL1O43813 399 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 SORBS2O94875 1100 aaKnown RBP2.55□□□□□ -2
SCFD1-213ENST00000554776 IGHG3P01860 377 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 FCER2P06734 321 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 CA3P07451 260 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 APRTP07741 180 aa2.55□□□□□ -2
SCFD1-213ENST00000554776 PAICSP22234 425 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms