RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 FAM111BQ6SJ93 734 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 DGAT2L6Q6ZPD8 337 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 GALNT12Q8IXK2 581 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 DEFB107AQ8IZN7 70 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 ST13P4Q8IZP2 240 aaPredicted RBP9.14□□□□□ -0.95
CHD8-204ENST00000553622 KIF2BQ8N4N8 673 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 DPP10Q8N608 796 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 RBM15BQ8NDT2 890 aaKnown RBP9.14□□□□□ -0.95
CHD8-204ENST00000553622 SUN3Q8TAQ9 357 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 KIAA1143Q96AT1 154 aaPredicted RBP9.14□□□□□ -0.95
CHD8-204ENST00000553622 ROPN1LQ96C74 230 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 AURKBQ96GD4 344 aaPredicted RBP9.14□□□□□ -0.95
CHD8-204ENST00000553622 SPSB2Q99619 263 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 CGREF1Q99674 301 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 PELOQ9BRX2 385 aaKnown RBP9.14□□□□□ -0.95
CHD8-204ENST00000553622 THUMPD3Q9BV44 507 aaKnown RBP9.14□□□□□ -0.95
CHD8-204ENST00000553622 TMEM121BQ9BXQ6 578 aaPredicted RBP9.14□□□□□ -0.95
CHD8-204ENST00000553622 PAIP1Q9H074 479 aaKnown RBP9.14□□□□□ -0.95
CHD8-204ENST00000553622 SLC26A1Q9H2B4 701 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 CXorf36Q9H7Y0 433 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 ANKRA2Q9H9E1 313 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 GPN2Q9H9Y4 310 aaPredicted RBP9.14□□□□□ -0.95
CHD8-204ENST00000553622 C3orf14Q9HBI5 128 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 NEUROD4Q9HD90 331 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 ADAP2Q9NPF8 381 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 EQTNQ9NQ60 294 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 SLC6A13Q9NSD5 602 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 ZCCHC3Q9NUD5 404 aaKnown RBP9.14□□□□□ -0.95
CHD8-204ENST00000553622 DDX18Q9NVP1 670 aaKnown RBP9.14□□□□□ -0.95
CHD8-204ENST00000553622 NDE1Q9NXR1 346 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 VAPAQ9P0L0 249 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 BCAP29Q9UHQ4 241 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 FARSAQ9Y285 508 aaKnown RBP9.14□□□□□ -0.95
CHD8-204ENST00000553622 MAN2B2Q9Y2E5 1009 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 L3MBTL1Q9Y468 752 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 PCDHB14Q9Y5E9 798 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 CLCA3PQ9Y6N3 262 aa9.14□□□□□ -0.95
CHD8-204ENST00000553622 IGKV3D-11A0A0A0MRZ8 115 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 LOC101059948A0A1B0GTJ6 334 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 TCRBV16S1A1N1A0A5B0 115 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 EVPLLA8MZ36 301 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 ATP1B1P05026 303 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 RAB40ALP0C0E4 278 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 UQCRC2P22695 453 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 PTPN4P29074 926 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 EFNA3P52797 238 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 MTPNP58546 118 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 NCALDP61601 193 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 RPS26P62854 115 aaKnown RBP9.13□□□□□ -0.95
CHD8-204ENST00000553622 IGLV3-21P80748 117 aaPredicted RBP9.13□□□□□ -0.95
CHD8-204ENST00000553622 PRR5P85299 388 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 BIKQ13323 160 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 CAMK2BQ13554 666 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 RTP5Q14D33 572 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 EXOSC7Q15024 291 aaKnown RBP9.13□□□□□ -0.95
CHD8-204ENST00000553622 MLC1Q15049 377 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 TGIF1Q15583 401 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 DNAL1Q4LDG9 190 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 ZNF628Q5EBL2 1059 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 DLEU7Q6UYE1 221 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 HACD2Q6Y1H2 254 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 ZNF517Q6ZMY9 492 aaPredicted RBP9.13□□□□□ -0.95
CHD8-204ENST00000553622 ANKRD37Q7Z713 158 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 VASH2Q86V25 355 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 PGAM4Q8N0Y7 254 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 VWA5B2Q8N398 1253 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 PLPP5Q8NEB5 264 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 OR7G2Q8NG99 324 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 OR2Y1Q8NGV0 311 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 DNAJB8Q8NHS0 232 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 JADE3Q92613 823 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 NKD1Q969G9 470 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 MCUR1Q96AQ8 359 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 C8orf44Q96CB5 159 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 ELP4Q96EB1 424 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 NAF1Q96HR8 494 aaKnown RBP9.13□□□□□ -0.95
CHD8-204ENST00000553622 SLC35G5Q96KT7 338 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 YIPF4Q9BSR8 244 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 SPRY4Q9C004 299 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 OR8D2Q9GZM6 311 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 PIF1Q9H611 641 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 SIRT3Q9NTG7 399 aaPredicted RBP9.13□□□□□ -0.95
CHD8-204ENST00000553622 SLC25A37Q9NYZ2 338 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 C19orf25Q9UFG5 118 aaPredicted RBP9.13□□□□□ -0.95
CHD8-204ENST00000553622 PACSIN3Q9UKS6 424 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 TCFL5Q9UL49 500 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 ERVK-19Q9WJR5 959 aa9.13□□□□□ -0.95
CHD8-204ENST00000553622 MRPS18BQ9Y676 258 aaKnown RBP9.13□□□□□ -0.95
CHD8-204ENST00000553622 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.13□□□□□ -0.95
CHD8-204ENST00000553622 EXPH5Q8NEV8 1989 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 C15orf38-AP3S2A0A0A6YYH1 394 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 C21orf140B9A014 251 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 FXYD1O00168 92 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 HRKO00198 91 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 CLIC1O00299 241 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 EMC8O43402 210 aa9.12□□□□□ -0.95
CHD8-204ENST00000553622 NME6O75414 186 aaPredicted RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 KLF7O75840 302 aaPredicted RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 DXOO77932 396 aaKnown RBP9.12□□□□□ -0.95
CHD8-204ENST00000553622 SEC24DO94855 1032 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms