RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 LRRC25Q8N386 305 aaPredicted RBP12.15□□□□□ -0.46
RAB5C-206ENST00000550406 MORN4Q8NDC4 146 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 C7orf57Q8NEG2 295 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 B3GNT7Q8NFL0 401 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 OR8J2Q8NGG1 315 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 OR1N1Q8NGS0 311 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 OR9A2Q8NGT5 310 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 OR14A16Q8NHC5 309 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 M1APQ8TC57 530 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 SLC2A12Q8TD20 617 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 KAT2AQ92830 837 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 EXTL1Q92935 676 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 TESCQ96BS2 214 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 SENP5Q96HI0 755 aaPredicted RBP12.15□□□□□ -0.46
RAB5C-206ENST00000550406 RILPQ96NA2 401 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 NPAS2Q99743 824 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 PELOQ9BRX2 385 aaKnown RBP12.15□□□□□ -0.46
RAB5C-206ENST00000550406 DUSP26Q9BV47 211 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 TRIM4Q9C037 500 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 BHLHE41Q9C0J9 482 aaPredicted RBP12.15□□□□□ -0.46
RAB5C-206ENST00000550406 FAM107BQ9H098 131 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 EPN3Q9H201 632 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 ANKRA2Q9H9E1 313 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 MMP25Q9NPA2 562 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 ATP13A2Q9NQ11 1180 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 SLC52A3Q9NQ40 469 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 ERVK-19Q9WJR5 959 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 ENTPD4Q9Y227 616 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 CLCA3PQ9Y6N3 262 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 SYNDIG1LA6NDD5 238 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 TMEM200CA6NKL6 621 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 PDPK1O15530 556 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 SLC22A3O75751 556 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 CEACAM4O75871 244 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 CBX7O95931 251 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 SERPINA7P05543 415 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 PCSK2P16519 638 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 NCF2P19878 526 aaPredicted RBP12.14□□□□□ -0.47
RAB5C-206ENST00000550406 NT5EP21589 574 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 SSTR4P31391 388 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 MPIP34949 423 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 RPL3P39023 403 aaKnown RBP12.14□□□□□ -0.47
RAB5C-206ENST00000550406 CCL11P51671 97 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 PGDP52209 483 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 NCBP2P52298 156 aaKnown RBP eCLIP12.14□□□□□ -0.47
RAB5C-206ENST00000550406 CLNS1AP54105 237 aaKnown RBP12.14□□□□□ -0.47
RAB5C-206ENST00000550406 RRADP55042 308 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 MRPS35P82673 323 aaKnown RBP12.14□□□□□ -0.47
RAB5C-206ENST00000550406 SRSF11Q05519 484 aaKnown RBP12.14□□□□□ -0.47
RAB5C-206ENST00000550406 RPS6KA2Q15349 733 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 EXT1Q16394 746 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 METTL21CQ5VZV1 264 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 H3F3CQ6NXT2 135 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 SPATA21Q7Z572 469 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 CPLX4Q7Z7G2 160 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 KBTBD2Q8IY47 623 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 SAMD14Q8IZD0 417 aaPredicted RBP12.14□□□□□ -0.47
RAB5C-206ENST00000550406 FAM9CQ8IZT9 166 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 MIER2Q8N344 545 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 GALNT16Q8N428 558 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 CPSF7Q8N684 471 aaKnown RBP12.14□□□□□ -0.47
RAB5C-206ENST00000550406 ZNF615Q8N8J6 731 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 OR7G2Q8NG99 324 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 ZNF675Q8TD23 568 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 TTC9Q92623 222 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 DAZLQ92904 295 aaKnown RBP12.14□□□□□ -0.47
RAB5C-206ENST00000550406 FBXL20Q96IG2 436 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 THOC3Q96J01 351 aaKnown RBP12.14□□□□□ -0.47
RAB5C-206ENST00000550406 VPS50Q96JG6 964 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 OR8D2Q9GZM6 311 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 SIRT3Q9NTG7 399 aaPredicted RBP12.14□□□□□ -0.47
RAB5C-206ENST00000550406 ACSS1Q9NUB1 689 aaPredicted RBP12.14□□□□□ -0.47
RAB5C-206ENST00000550406 GIMAP4Q9NUV9 329 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 MAPRE3Q9UPY8 281 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 USP24Q9UPU5 2620 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 ZZEF1O43149 2961 aa12.14□□□□□ -0.47
RAB5C-206ENST00000550406 MGAQ8IWI9 3026 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 EML6Q6ZMW3 1958 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 EXPH5Q8NEV8 1989 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 A6NL46 340 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 MAN1A2O60476 641 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 NME6O75414 186 aaPredicted RBP12.13□□□□□ -0.47
RAB5C-206ENST00000550406 ICAM2P13598 275 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 NTSP30990 170 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 CDK9P50750 372 aaKnown RBP12.13□□□□□ -0.47
RAB5C-206ENST00000550406 SLC37A1P57057 533 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 SQLEQ14534 574 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 EXOSC7Q15024 291 aaKnown RBP12.13□□□□□ -0.47
RAB5C-206ENST00000550406 MLC1Q15049 377 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 FAM174BQ3ZCQ3 159 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 BORAQ6PGQ7 559 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 GPR155Q7Z3F1 870 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 GALNT12Q8IXK2 581 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 CLECL1Q8IZS7 167 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 FDCSPQ8NFU4 85 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 BRIX1Q8TDN6 353 aaKnown RBP12.13□□□□□ -0.47
RAB5C-206ENST00000550406 APOBEC4Q8WW27 367 aaKnown RBP12.13□□□□□ -0.47
RAB5C-206ENST00000550406 VMP1Q96GC9 406 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 CCT8L2Q96SF2 557 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 PRPF18Q99633 342 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms