RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 NSMCE4AQ9NXX6 385 aa9.02□□□□□ -0.97
TRAFD1-207ENST00000550051 WWOXQ9NZC7 414 aa9.02□□□□□ -0.97
TRAFD1-207ENST00000550051 ADGRE2Q9UHX3 823 aa9.02□□□□□ -0.97
TRAFD1-207ENST00000550051 PPP2R2CQ9Y2T4 447 aa9.02□□□□□ -0.97
TRAFD1-207ENST00000550051 TSC22D4Q9Y3Q8 395 aa9.02□□□□□ -0.97
TRAFD1-207ENST00000550051 CLCA1A8K7I4 914 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 TP53I11O14683 189 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 TRAPPC6AO75865 159 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 HEXAP06865 529 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 CPN1P15169 458 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 BMP7P18075 431 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 SSR2P43308 183 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 RPL21P46778 160 aaKnown RBP9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 SLC12A2P55011 1212 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 HERVK_113P63132 956 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 ERVK-8P63133 956 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 ZNF267Q14586 743 aaPredicted RBP9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 EBPQ15125 230 aaKnown RBP9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 OR4D1Q15615 310 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 FBXO48Q5FWF7 155 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 FNDC7Q5VTL7 733 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 C18orf63Q68DL7 685 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 RNF111Q6ZNA4 994 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 Q71RC1 249 aaPredicted RBP9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 CXorf67Q86X51 503 aaPredicted RBP9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 TAGAPQ8N103 731 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 ZNF441Q8N8Z8 693 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 SPPL2AQ8TCT8 520 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 SMPDL3BQ92485 455 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 DIO2Q92813 273 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 RIT1Q92963 219 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 ISL2Q96A47 359 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 RGMAQ96B86 450 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 UBXN10Q96LJ8 280 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 ZNF597Q96LX8 424 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 GNRHR2Q96P88 292 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 UCN2Q96RP3 112 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 ERVK-6Q9BXR3 956 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 DDX47Q9H0S4 455 aaKnown RBP9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 PSD3Q9NYI0 1048 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 PHF11Q9UIL8 331 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 ERVK-19Q9WJR5 959 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 MTO1Q9Y2Z2 717 aaKnown RBP9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 ASB4Q9Y574 426 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 NPFFR2Q9Y5X5 522 aa9.01□□□□□ -0.97
TRAFD1-207ENST00000550051 NSD1Q96L73 2696 aaPredicted RBP9□□□□□ -0.97
TRAFD1-207ENST00000550051 C2orf92A0A1B0GVN3 265 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 E7ESA3 106 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 TP73O15350 636 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 ARHGEF9O43307 516 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 CDH16O75309 829 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 RCBTB2O95199 551 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 ACTL6AO96019 429 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 CLPSP04118 112 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 SLC35E2BP0CK96 405 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 SLC35E2P0CK97 266 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 CD1DP15813 335 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 PTX3P26022 381 aaPredicted RBP9□□□□□ -0.97
TRAFD1-207ENST00000550051 PIK3CBP42338 1070 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 CASP3P42574 277 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 PCYT1AP49585 367 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 ARL4CP56559 192 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 EEF1A1P68104 462 aaKnown RBP9□□□□□ -0.97
TRAFD1-207ENST00000550051 TNFRSF17Q02223 184 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 EEF1A1P5Q5VTE0 462 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 TIGD3Q6B0B8 471 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 MRM1Q6IN84 353 aaKnown RBP9□□□□□ -0.97
TRAFD1-207ENST00000550051 PRSS57Q6UWY2 283 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 CAPN12Q6ZSI9 719 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 CYS1Q717R9 158 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 LRRC70Q7Z2Q7 622 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 ANKMY2Q8IV38 441 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 SPATA6LQ8N4H0 392 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 TSPAN17Q96FV3 270 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 TMEM41AQ96HV5 264 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 RILPQ96NA2 401 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 ZFP3Q96NJ6 502 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 TRIB1Q96RU8 372 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 PIP5K1AQ99755 562 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 YIPF4Q9BSR8 244 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 UGT2B28Q9BY64 529 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 OR51B5Q9H339 312 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 SNX15Q9NRS6 342 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 CD274Q9NZQ7 290 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 CAMK2AQ9UQM7 478 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 C15orf41Q9Y2V0 281 aa9□□□□□ -0.97
TRAFD1-207ENST00000550051 EXPH5Q8NEV8 1989 aa8.99□□□□□ -0.97
TRAFD1-207ENST00000550051 A0A1W2PPR1 153 aa8.99□□□□□ -0.97
TRAFD1-207ENST00000550051 A0A1W2PR48 441 aa8.99□□□□□ -0.97
TRAFD1-207ENST00000550051 WASHC1A8K0Z3 465 aa8.99□□□□□ -0.97
TRAFD1-207ENST00000550051 K7EPI3 171 aa8.99□□□□□ -0.97
TRAFD1-207ENST00000550051 SAP18O00422 153 aaKnown RBP8.99□□□□□ -0.97
TRAFD1-207ENST00000550051 PLPP1O14494 284 aa8.99□□□□□ -0.97
TRAFD1-207ENST00000550051 OR10H2O60403 315 aa8.99□□□□□ -0.97
TRAFD1-207ENST00000550051 CCNT2O60583 730 aaKnown RBP8.99□□□□□ -0.97
TRAFD1-207ENST00000550051 LY6G6DO95868 133 aa8.99□□□□□ -0.97
TRAFD1-207ENST00000550051 TMIGD3P0DMS9 266 aaPredicted RBP8.99□□□□□ -0.97
TRAFD1-207ENST00000550051 PCNAP12004 261 aa8.99□□□□□ -0.97
TRAFD1-207ENST00000550051 NAGAP17050 411 aa8.99□□□□□ -0.97
TRAFD1-207ENST00000550051 BUD31P41223 144 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms