RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SLC17A4Q9Y2C5 497 aa12.02□□□□□ -0.49
SCAF11-209ENST00000547018 PRAMEF27A3QJZ7 478 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 SMIM30A4D0T7 59 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 GMFGO60234 142 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 FCMRO60667 390 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 CCNB2O95067 398 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 ARAFP10398 606 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 CKMT1AP12532 417 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 KIAA1161Q6NSJ0 714 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 VRK2Q86Y07 508 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 TBC1D19Q8N5T2 526 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 GPR32P1Q8NGA4 272 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 CREB3L4Q8TEY5 395 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 WDR34Q96EX3 536 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 S1PR5Q9H228 398 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 CHST8Q9H2A9 424 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 EPB41L1Q9H4G0 881 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 RNF167Q9H6Y7 350 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 PELI2Q9HAT8 420 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 C8orf4Q9NR00 106 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 ACER3Q9NUN7 267 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 ZNF780BQ9Y6R6 833 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 KPNA4O00629 521 aaPredicted RBP12.01□□□□□ -0.49
SCAF11-209ENST00000547018 GNB5O14775 395 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 P2RX6O15547 441 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 GABRG2P18507 467 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 CNR2P34972 360 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 XKP51811 444 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 CRISP3P54108 245 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 PDE7AQ13946 482 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 ARHGAP19Q14CB8 494 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 SEC23BQ15437 767 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 ALG11Q2TAA5 492 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 RBM48Q5RL73 367 aaKnown RBP12.01□□□□□ -0.49
SCAF11-209ENST00000547018 PERM1Q5SV97 790 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 RRM2BQ7LG56 351 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 CCDC103Q8IW40 242 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 PJA1Q8NG27 643 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 NDNFQ8TB73 568 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 FAM3CQ92520 227 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 NCSTNQ92542 709 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 CDCA3Q99618 268 aaPredicted RBP12.01□□□□□ -0.49
SCAF11-209ENST00000547018 PIP5K1AQ99755 562 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 MVB12BQ9H7P6 319 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 SIRT3Q9NTG7 399 aaPredicted RBP12.01□□□□□ -0.49
SCAF11-209ENST00000547018 GIMAP4Q9NUV9 329 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 MS4A12Q9NXJ0 267 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 TVP23BQ9NYZ1 205 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 USE1Q9NZ43 259 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 ANKMY1Q9P2S6 941 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 KLF15Q9UIH9 416 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 PCDHGA6Q9Y5G7 932 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 TTC28Q96AY4 2481 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 TICRRQ7Z2Z1 1910 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 ZNF99A8MXY4 864 aaPredicted RBP12.01□□□□□ -0.49
SCAF11-209ENST00000547018 HCRTR1O43613 425 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 SLC35G6P0C7Q6 338 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 DBTP11182 482 aaKnown RBP12.01□□□□□ -0.49
SCAF11-209ENST00000547018 HNRNPA2B1P22626 353 aaKnown RBP12.01□□□□□ -0.49
SCAF11-209ENST00000547018 CHRNEQ04844 493 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 NFATC3Q12968 1075 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 FADDQ13158 208 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 DCST1Q5T197 706 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 FAM111BQ6SJ93 734 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 OR2L8Q8NGY9 312 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 NACC2Q96BF6 587 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 DNAJA3Q96EY1 480 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 FNDC11Q9BVV2 318 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 GPR52Q9Y2T5 361 aa12.01□□□□□ -0.49
SCAF11-209ENST00000547018 MED12Q93074 2177 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 FFAR1O14842 300 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 NT5EP21589 574 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 CCR3P51677 355 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 GP2P55259 537 aaKnown RBP12□□□□□ -0.49
SCAF11-209ENST00000547018 ZNF33BQ06732 778 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 PTGES3Q15185 160 aaKnown RBP12□□□□□ -0.49
SCAF11-209ENST00000547018 MLIPQ5VWP3 458 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 FAM92BQ6ZTR7 304 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 PRSS58Q8IYP2 241 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 SLC16A11Q8NCK7 471 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 GAS2L1Q99501 681 aaPredicted RBP12□□□□□ -0.49
SCAF11-209ENST00000547018 TIMM29Q9BSF4 260 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 PCDHGA10Q9Y5H3 936 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 ENPP4Q9Y6X5 453 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 FAM186AA6NE01 2351 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 BCAS1O75363 584 aaPredicted RBP12□□□□□ -0.49
SCAF11-209ENST00000547018 WBP4O75554 376 aaKnown RBP12□□□□□ -0.49
SCAF11-209ENST00000547018 MYF5P13349 255 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 CSNK2A2P19784 350 aaPredicted RBP12□□□□□ -0.49
SCAF11-209ENST00000547018 HSD17B2P37059 387 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 EIF2DP41214 584 aaKnown RBP12□□□□□ -0.49
SCAF11-209ENST00000547018 TNFRSF4P43489 277 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 ITGADQ13349 1161 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 AQP6Q13520 282 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 DCTN2Q13561 401 aaKnown RBP12□□□□□ -0.49
SCAF11-209ENST00000547018 NFATC4Q14934 902 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 MICAQ29983 383 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 FIGLAQ6QHK4 219 aa12□□□□□ -0.49
SCAF11-209ENST00000547018 IQCHQ86VS3 1027 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms