RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 BCORQ6W2J9 1755 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 ARFGEF2Q9Y6D5 1785 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 KIF7Q2M1P5 1343 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 CDHR2Q9BYE9 1310 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 A8MXE2 369 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 TBX10O75333 385 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 PGLSO95336 258 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 FGF19O95750 216 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 MGMTP16455 207 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 SLC39A6Q13433 755 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 TTC31Q49AM3 519 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-224ENST00000545688 MFSD4BQ5TF39 518 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 ZNF530Q6P9A1 599 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-224ENST00000545688 RFPL4BQ6ZWI9 263 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 CHST3Q7LGC8 479 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 DNAJB7Q7Z6W7 309 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-224ENST00000545688 HEXDCQ8WVB3 486 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 VPS33AQ96AX1 596 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 NUS1Q96E22 293 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 PPP1R16AQ96I34 528 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 MCCC1Q96RQ3 725 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-224ENST00000545688 SH3GLB2Q9NR46 395 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 NOCTQ9UK39 431 aaKnown RBP3.28□□□□□ -1.88
SNHG1-224ENST00000545688 ITGA11Q9UKX5 1188 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 FBXO7Q9Y3I1 522 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 HBS1LQ9Y450 684 aaKnown RBP3.28□□□□□ -1.88
SNHG1-224ENST00000545688 PCDHGA1Q9Y5H4 931 aa3.28□□□□□ -1.88
SNHG1-224ENST00000545688 NPC1L1Q9UHC9 1359 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 CACNA1SQ13698 1873 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 KLF18A0A0U1RQI7 1052 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 E2F3O00716 465 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 P4HA2O15460 535 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 IGHG3P01860 377 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 FASP25445 335 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 SRD5A2P31213 254 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 PTENP60484 403 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 RASA2Q15283 850 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 C2orf83Q53S99 150 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 TCP11X2Q5H9J9 407 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 CGB2Q6NT52 195 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 ZNF600Q6ZNG1 722 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 TDHQ8IZJ6 230 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 NME8Q8N427 588 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 ZNF781Q8N8C0 355 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 IQUBQ8NA54 791 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 ST6GALNAC6Q969X2 333 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 SLC35C1Q96A29 364 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 TXLNGYQ9BZA5 131 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 UBE2TQ9NPD8 197 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-224ENST00000545688 ANKEF1Q9NU02 776 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 LAMA2P24043 3122 aaKnown RBP3.27□□□□□ -1.89
SNHG1-224ENST00000545688 RIC1Q4ADV7 1423 aa3.27□□□□□ -1.89
SNHG1-224ENST00000545688 ZNF724A8MTY0 619 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 FAM86B1E9PN63 330 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 HDAC3O15379 428 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 P2RX6O15547 441 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 LRRTM2O43300 516 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 B4GAT1O43505 415 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 CALCAP01258 141 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 CCDC175P0C221 793 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 FAM86B2P0C5J1 330 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 ANKRD34CP0C6C1 535 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 EEF1DP29692 281 aaKnown RBP3.26□□□□□ -1.89
SNHG1-224ENST00000545688 RAD52P43351 418 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 BRCC3P46736 316 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 KRTAP10-1P60331 282 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 CRMP1Q14194 572 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 ARMCX4Q5H9R4 360 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 PLPP4Q5VZY2 271 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 REP15Q6BDI9 236 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 TXNRD3NBQ6F5E7 133 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 ERN2Q76MJ5 926 aaKnown RBP3.26□□□□□ -1.89
SNHG1-224ENST00000545688 ADCK2Q7Z695 626 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 OR13C5Q8NGS8 318 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 OCC1Q8TAD7 63 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 ESAMQ96AP7 390 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 BPIFA2Q96DR5 249 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 TEX13AQ9BXU3 409 aaPredicted RBP3.26□□□□□ -1.89
SNHG1-224ENST00000545688 DEFB126Q9BYW3 111 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 ZBP1Q9H171 429 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 MTIF3Q9H2K0 278 aaKnown RBP3.26□□□□□ -1.89
SNHG1-224ENST00000545688 RABEP2Q9H5N1 569 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 CCL27Q9Y4X3 112 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 SCN7AQ01118 1682 aa3.26□□□□□ -1.89
SNHG1-224ENST00000545688 SCN11AQ9UI33 1791 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 KIAA1217Q5T5P2 1943 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 ZSCAN5CA6NGD5 496 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-224ENST00000545688 ANXA2P2A6NMY6 339 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 YDJCA8MPS7 323 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 ZNF487B1APH4 448 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 E7ENQ6 273 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 ACSL4O60488 711 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 RHBDL1O75783 438 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 KRT3P12035 628 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 HMGCS2P54868 508 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 FKBP1BP68106 108 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 RPP38P78345 283 aaKnown RBP3.25□□□□□ -1.89
SNHG1-224ENST00000545688 C1orf141Q5JVX7 400 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 SLC30A6Q6NXT4 461 aa3.25□□□□□ -1.89
SNHG1-224ENST00000545688 TMEM182Q6ZP80 229 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms