RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-231ENST00000544639 CCZ1BP86790 482 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 CCZ1P86791 482 aaPredicted RBP3.29□□□□□ -1.88
RAP1B-231ENST00000544639 AP1B1Q10567 949 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 ZNF239Q16600 458 aaKnown RBP3.29□□□□□ -1.88
RAP1B-231ENST00000544639 GPAT3Q53EU6 434 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 EIPR1Q53HC9 387 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 NHLRC3Q5JS37 347 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 LIPJQ5W064 366 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 STEAP1BQ6NZ63 245 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 DLEU7Q6UYE1 221 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 CEACAM19Q7Z692 300 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 PEX5LQ8IYB4 626 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 SLC39A11Q8N1S5 342 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 BEST4Q8NFU0 473 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 FBXO25Q8TCJ0 367 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 P3H4Q92791 437 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 NAP1L3Q99457 506 aaPredicted RBP3.29□□□□□ -1.88
RAP1B-231ENST00000544639 ST6GALNAC5Q9BVH7 336 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 ZNF581Q9P0T4 197 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 VPS54Q9P1Q0 977 aa3.29□□□□□ -1.88
RAP1B-231ENST00000544639 TP53BP1Q12888 1972 aaPredicted RBP3.29□□□□□ -1.88
RAP1B-231ENST00000544639 DHX29Q7Z478 1369 aaKnown RBP3.28□□□□□ -1.88
RAP1B-231ENST00000544639 MACROD2A1Z1Q3 448 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 ZNF840PA6NDX5 716 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 TRIM64A6NGJ6 449 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 TRIM64BA6NI03 449 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 CCDC69A6NI79 296 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 E2F3O00716 465 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 SH2D1BO14796 132 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 GPRIN2O60269 458 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 LRP3O75074 770 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 SRSF10O75494 262 aaKnown RBP3.28□□□□□ -1.88
RAP1B-231ENST00000544639 VENTXO95231 258 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 FCGR3AP08637 254 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 ACADSBP45954 432 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 NT5C2P49902 561 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 NDST1P52848 882 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 RPS4XP62701 263 aaKnown RBP3.28□□□□□ -1.88
RAP1B-231ENST00000544639 PPP1R8Q12972 351 aaKnown RBP3.28□□□□□ -1.88
RAP1B-231ENST00000544639 CBX3Q13185 183 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 HAGHQ16775 308 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 C17orf58Q2M2W7 97 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 C15orf32Q32M92 178 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 ANKRD55Q3KP44 614 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 ETFRF1Q6IPR1 90 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 ASRGL1Q7L266 308 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 LINC00518Q8N0U6 118 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 SUMF1Q8NBK3 374 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 SPATA13Q96N96 652 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 TEX13AQ9BXU3 409 aaPredicted RBP3.28□□□□□ -1.88
RAP1B-231ENST00000544639 ABCG4Q9H172 646 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 IL1RL2Q9HB29 575 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 CLEC5AQ9NY25 188 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 TRIM10Q9UDY6 481 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 SLC6A5Q9Y345 797 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 SMAD5-AS1Q9Y6J3 95 aa3.28□□□□□ -1.88
RAP1B-231ENST00000544639 NPC1L1Q9UHC9 1359 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 AFF2P51816 1311 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 FAM205AQ6ZU69 1335 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 TRIM49BA6NDI0 452 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 MCF2LO15068 1137 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 ARPC1BO15143 372 aaKnown RBP3.27□□□□□ -1.89
RAP1B-231ENST00000544639 ZNF354AO60765 605 aaPredicted RBP3.27□□□□□ -1.89
RAP1B-231ENST00000544639 APRTP07741 180 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 FAM200BP0CF97 657 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 VDRP11473 427 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 CALML3P27482 149 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 TRIM23P36406 574 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 MATKP42679 507 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 CCL11P51671 97 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 HNRNPFP52597 415 aaKnown RBP3.27□□□□□ -1.89
RAP1B-231ENST00000544639 ZNF131P52739 623 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 SRP54P61011 504 aaKnown RBP3.27□□□□□ -1.89
RAP1B-231ENST00000544639 HKDC1Q2TB90 917 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 KRT71Q3SY84 523 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 SEL1L3Q68CR1 1132 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 HIST2H2AA3Q6FI13 130 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 MARCH9Q86YJ5 346 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 TMEM185AQ8NFB2 350 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 KIAA1524Q8TCG1 905 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 MGARPQ8TDB4 240 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 TTYH2Q9BSA4 534 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 TAS2R16Q9NYV7 291 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 ERVK-18Q9QC07 812 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 SEC14L4Q9UDX3 406 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 TUBGCP4Q9UGJ1 667 aa3.27□□□□□ -1.89
RAP1B-231ENST00000544639 A0A087WWV3 80 aa3.26□□□□□ -1.89
RAP1B-231ENST00000544639 A0A0A6YYD4 124 aa3.26□□□□□ -1.89
RAP1B-231ENST00000544639 SLC9B1P1A6NJY1 282 aa3.26□□□□□ -1.89
RAP1B-231ENST00000544639 E9PAM4 449 aa3.26□□□□□ -1.89
RAP1B-231ENST00000544639 NME2P1O60361 137 aa3.26□□□□□ -1.89
RAP1B-231ENST00000544639 HSF2BPO75031 334 aa3.26□□□□□ -1.89
RAP1B-231ENST00000544639 SYNGR4O95473 234 aa3.26□□□□□ -1.89
RAP1B-231ENST00000544639 HIST1H2AGP0C0S8 130 aaPredicted RBP3.26□□□□□ -1.89
RAP1B-231ENST00000544639 GP9P14770 177 aa3.26□□□□□ -1.89
RAP1B-231ENST00000544639 MARCKSP29966 332 aaPredicted RBP3.26□□□□□ -1.89
RAP1B-231ENST00000544639 PPP2R1BP30154 601 aa3.26□□□□□ -1.89
RAP1B-231ENST00000544639 MAT2AP31153 395 aaKnown RBP3.26□□□□□ -1.89
RAP1B-231ENST00000544639 YBEYP58557 167 aaPredicted RBP3.26□□□□□ -1.89
RAP1B-231ENST00000544639 NLRP11P59045 1033 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms