RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 FAM83HQ6ZRV2 1179 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 AKAP14Q86UN6 197 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 HEATR4Q86WZ0 1026 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 KRT78Q8N1N4 520 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 FAM26EQ8N5C1 309 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 DEFB123Q8N688 67 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 NANOGP1Q8N7R0 232 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 FAM181AQ8N9Y4 354 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 TMIEQ8NEW7 156 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 PROKR2Q8NFJ6 384 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 IL17RDQ8NFM7 739 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 OR4D11Q8NGI4 311 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 WDR36Q8NI36 951 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 SETD6Q8TBK2 473 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 WFIKKN2Q8TEU8 576 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 KLHL6Q8WZ60 621 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 HTRA1Q92743 480 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 RAD51AP1Q96B01 352 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 ARRDC3Q96B67 414 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 ANAPC16Q96DE5 110 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 TMEM80Q96HE8 168 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 TMEM19Q96HH6 336 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 SHDQ96IW2 340 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF354BQ96LW1 612 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 CNTNAP3BQ96NU0 1288 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 WDFY2Q96P53 400 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 MENTQ9BUN1 341 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 SORBS1Q9BX66 1292 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 MS4A8Q9BY19 250 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 CNTNAP3Q9BZ76 1288 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 BARHL1Q9BZE3 327 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 PITHD1Q9GZP4 211 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 SERHL2Q9H4I8 314 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 LIN7BQ9HAP6 207 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 LHX9Q9NQ69 397 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 WASH6PQ9NQA3 447 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 MIEF1Q9NQG6 463 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 TAS2R7Q9NYW3 318 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 AHSPQ9NZD4 102 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 EHD3Q9NZN3 535 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 RHCGQ9UBD6 479 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 CRNNQ9UBG3 495 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 SEC14L4Q9UDX3 406 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC27A6Q9Y2P4 619 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 CAB39Q9Y376 341 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 WNT6Q9Y6F9 365 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 PTPRSQ13332 1948 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 COL4A3Q01955 1670 aa4.92□□□□□ -1.62
ATPAF1-212ENST00000542495 LAMA3Q16787 3333 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 IQCMA0A1B0GVH7 501 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 A0A1W2PRQ8 180 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 HYKKA2RU49 373 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 PRAMEF27A3QJZ7 478 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 HEPACAM2A8MVW5 462 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 C5orf58C9J3I9 102 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF670-ZNF695F2Z2N8 137 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 H3BQ06 376 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 HMGN4O00479 90 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 KPNA3O00505 521 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 CTDSP2O14595 271 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC9A3R1O14745 358 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 CAPN5O15484 640 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 HOXC11O43248 304 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TPST2O60704 377 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 EFCAB14O75071 495 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 CSO75390 466 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 UGT2B17O75795 530 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 PDE9AO76083 593 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 DLGAP3O95886 979 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 LGI1O95970 557 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 PRNPP04156 253 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 BCHEP06276 602 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 H1F0P07305 194 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 RHOP08100 348 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 IGFBP1P08833 259 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 HBQ1P09105 142 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 GSTT2P0CG29 244 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 GSTT2BP0CG30 244 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 HSMCR30P0CW71 290 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 C6P13671 934 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ALOX12P18054 663 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TNFSF8P32971 234 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 RPS19P39019 145 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 GPR1P46091 355 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 XKP51811 444 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 GAS1P54826 345 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 SMIM11AP58511 58 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 DEFA1P59665 94 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 DEFA3P59666 94 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 CYP4F2P78329 520 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 REEP5Q00765 189 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF91Q05481 1191 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 MLLT11Q13015 90 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 NFE2L1Q14494 772 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 HEPACAMQ14CZ8 416 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 DHCR24Q15392 516 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 SPHARQ15513 63 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 POM121L1PQ3SYA9 428 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 LEXMQ3ZCV2 418 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 RPS26P11Q5JNZ5 115 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms