RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 OR51J1Q9H342 316 aa12.4□□□□□ -0.42
DNMT1-203ENST00000540357 NDUFAF4Q9P032 175 aa12.4□□□□□ -0.42
DNMT1-203ENST00000540357 STOX2Q9P2F5 926 aaPredicted RBP12.4□□□□□ -0.42
DNMT1-203ENST00000540357 FXYD6-FXYD2A0A087WZ82 144 aa12.4□□□□□ -0.43
DNMT1-203ENST00000540357 ANXA2P2A6NMY6 339 aa12.4□□□□□ -0.43
DNMT1-203ENST00000540357 TNFRSF10BO14763 440 aa12.4□□□□□ -0.43
DNMT1-203ENST00000540357 TSPAN6O43657 245 aa12.4□□□□□ -0.43
DNMT1-203ENST00000540357 CSO75390 466 aaKnown RBP12.4□□□□□ -0.43
DNMT1-203ENST00000540357 KCNK2O95069 426 aa12.4□□□□□ -0.43
DNMT1-203ENST00000540357 GASTP01350 101 aa12.4□□□□□ -0.43
DNMT1-203ENST00000540357 ANXA2P07355 339 aaKnown RBP12.4□□□□□ -0.43
DNMT1-203ENST00000540357 MAN2A2P49641 1150 aa12.4□□□□□ -0.43
DNMT1-203ENST00000540357 TAP2Q03519 686 aa12.4□□□□□ -0.43
DNMT1-203ENST00000540357 JAZF1Q86VZ6 243 aa12.4□□□□□ -0.43
DNMT1-203ENST00000540357 ACBD7Q8N6N7 88 aa12.4□□□□□ -0.43
DNMT1-203ENST00000540357 ASB11Q8WXH4 323 aa12.4□□□□□ -0.43
DNMT1-203ENST00000540357 ECHDC3Q96DC8 303 aa12.4□□□□□ -0.43
DNMT1-203ENST00000540357 SMIM14Q96QK8 99 aa12.4□□□□□ -0.43
DNMT1-203ENST00000540357 FXYD6Q9H0Q3 95 aa12.4□□□□□ -0.43
DNMT1-203ENST00000540357 RC3H2Q9HBD1 1191 aaKnown RBP12.4□□□□□ -0.43
DNMT1-203ENST00000540357 TRAPPC4Q9Y296 219 aa12.4□□□□□ -0.43
DNMT1-203ENST00000540357 LOC102723532A0A0G2JNH3 316 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 KANTRA0A1W2PQU2 76 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 C1QBP02746 253 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 ARFIP1P53367 373 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 CTBSQ01459 385 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 MLLT1Q03111 559 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 PYCR3Q53H96 274 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 RNF44Q7L0R7 432 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 VASH1Q7L8A9 365 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 SPERTQ8NA61 448 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 MOSPD2Q8NHP6 518 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 SETD7Q8WTS6 366 aaKnown RBP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 S100A16Q96FQ6 103 aaKnown RBP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 ZNF354BQ96LW1 612 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 PTPN18Q99952 460 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 NIPSNAP1Q9BPW8 284 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 LGR4Q9BXB1 951 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 IMP3Q9NV31 184 aaKnown RBP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 STON1Q9Y6Q2 735 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 A0A0U1RQS6 177 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 POLR1CO15160 346 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 GABRA5P31644 462 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 SLC19A1P41440 591 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 SNRPGP62308 76 aaKnown RBP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 PUDPQ08623 228 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 ILKQ13418 452 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 TSC22D1Q15714 1073 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 CCDC58Q4VC31 144 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 NXPE4Q6UWF7 544 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 SERPINA13PQ6UXR4 307 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 TMCO2Q7Z6W1 182 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 SLC22A15Q8IZD6 547 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 KIAA1958Q8N8K9 716 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 TRIB2Q92519 343 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 ZSWIM3Q96MP5 696 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 RTP3Q9BQQ7 232 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 C7orf50Q9BRJ6 194 aaKnown RBP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 C1QTNF7Q9BXJ2 289 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 PPA2Q9H2U2 334 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 MYNNQ9NPC7 610 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 B3GNT2Q9NY97 397 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 IL36AQ9UHA7 158 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 TAC3Q9UHF0 121 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 I6L893 689 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 RGS13O14921 159 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 HLA-DQA2P01906 255 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 ALPPL2P10696 532 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 ACP2P11117 423 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 EDNRAP25101 427 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 SLC11A1P49279 550 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 RPS26P62854 115 aaKnown RBP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 TMEM115Q12893 351 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 C3orf38Q5JPI3 329 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 ZNF782Q6ZMW2 699 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 CCDC190Q86UF4 302 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 AMZ2Q86W34 360 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 CALHM3Q86XJ0 350 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 PM20D2Q8IYS1 436 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 OR6C4Q8NGE1 309 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 FCAMRQ8WWV6 532 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 RNF167Q9H6Y7 350 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 TAS2R10Q9NYW0 307 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 DIMT1Q9UNQ2 313 aaKnown RBP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 J3KTA2 159 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 GPR39O43194 453 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 LRRTM2O43300 516 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 ACTC1P68032 377 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 ACTA1P68133 377 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 ARSIQ5FYB1 569 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 SLC35F1Q5T1Q4 408 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 FAM198BQ6UWH4 519 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 SPAG16Q8N0X2 631 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 CIDECQ96AQ7 238 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-203ENST00000540357 NUS1Q96E22 293 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 RAB11FIP5Q9BXF6 653 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 TMEM5Q9Y2B1 443 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 ASB1Q9Y576 335 aa12.39□□□□□ -0.43
DNMT1-203ENST00000540357 FAM25EA8MYX2 175 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms