RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 TP53INP1Q96A56 240 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 TM4SF18Q96CE8 201 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 GAL3ST4Q96RP7 486 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 TTTY12Q9BZ98 90 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 ACPTQ9BZG2 426 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 SHCBP1LQ9BZQ2 653 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 GSTO2Q9H4Y5 243 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 ZDHHC11Q9H8X9 412 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 ANKZF1Q9H8Y5 726 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 IL1RL2Q9HB29 575 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 SH2D2AQ9NP31 389 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 SH3BGRL2Q9UJC5 107 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 MID2Q9UJV3 735 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 CES1P1Q9UKY3 287 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 PSME2Q9UL46 239 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 GRID1Q9ULK0 1009 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 ENTPD4Q9Y227 616 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 MEMO1Q9Y316 297 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 TEX15Q9BXT5 2789 aa10.68□□□□□ -0.7
RTN3-209ENST00000538995 A0A0G2JMM0 328 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 A0A1W2PPB8 328 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 A0A1W2PPM1 405 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 A0A1W2PRS3 328 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 KIR3DP1A8MWS1 328 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 CAPN14A8MX76 684 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 E9PLN8 166 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 PLIN3O60664 434 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 NUDT17P0C025 328 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 CCL3P10147 92 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 CSNK2A2P19784 350 aaPredicted RBP10.67□□□□□ -0.7
RTN3-209ENST00000538995 SERPINB3P29508 390 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 PTGS2P35354 604 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 DEKP35659 375 aaKnown RBP10.67□□□□□ -0.7
RTN3-209ENST00000538995 RFC3P40938 356 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 SLCO1A2P46721 670 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 TMED10P49755 219 aaKnown RBP10.67□□□□□ -0.7
RTN3-209ENST00000538995 SMSP52788 366 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 PPIAP62937 165 aaKnown RBP10.67□□□□□ -0.7
RTN3-209ENST00000538995 HSF1Q00613 529 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 PLGLB1Q02325 96 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 ACSM2AQ08AH3 577 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 ZNF750Q32MQ0 723 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 TCHHL1Q5QJ38 904 aaPredicted RBP10.67□□□□□ -0.7
RTN3-209ENST00000538995 ACSM2BQ68CK6 577 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 HIST2H2BCQ6DN03 193 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 GALNT18Q6P9A2 607 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 XKRXQ6PP77 449 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 FRMD7Q6ZUT3 714 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 FAM47EQ6ZV65 393 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 FGD2Q7Z6J4 655 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 MRGPRGQ86SM5 289 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 SAMD14Q8IZD0 417 aaPredicted RBP10.67□□□□□ -0.7
RTN3-209ENST00000538995 VWA5B2Q8N398 1253 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 FBXW8Q8N3Y1 598 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 FAM109AQ8N4B1 249 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 FAM57AQ8TBR7 257 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 UCN3Q969E3 161 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 HBEGFQ99075 208 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 VKORC1Q9BQB6 163 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 SIRT5Q9NXA8 310 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 MKS1Q9NXB0 559 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 CNIH4Q9P003 139 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 CFL2Q9Y281 166 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 CROCCQ5TZA2 2017 aa10.67□□□□□ -0.7
RTN3-209ENST00000538995 A0A1B0GTH9 108 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 C2orf92A0A1B0GVN3 265 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 A0A1W2PS29 197 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 PINLYPA6NC86 204 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 OR14I1A6ND48 311 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 SMIM23A6NLE4 172 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 COPEO14579 308 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 PCDH7O60245 1069 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 IGHG3P01860 377 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 DRD2P14416 443 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 KRT4P19013 534 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 NT5EP21589 574 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 SSTR4P31391 388 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 HTR6P50406 440 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 ADORA2A-AS1P86434 159 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 SLC18A2Q05940 514 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 FOXO1Q12778 655 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 MAP4K2Q12851 820 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 NTRK2Q16620 822 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 CFAP157Q5JU67 520 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 TBCELQ5QJ74 424 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 HLA-DQA1Q5Y7H0 255 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 SLC22A10Q63ZE4 541 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 DOLPP1Q86YN1 238 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 HOMEZQ8IX15 550 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 LRRC25Q8N386 305 aaPredicted RBP10.66□□□□□ -0.7
RTN3-209ENST00000538995 CCNYL1Q8N7R7 359 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 ZNF615Q8N8J6 731 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 EPS8L3Q8TE67 593 aaKnown RBP10.66□□□□□ -0.7
RTN3-209ENST00000538995 SREK1Q8WXA9 508 aaKnown RBP10.66□□□□□ -0.7
RTN3-209ENST00000538995 KLHL29Q96CT2 875 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 ERP27Q96DN0 273 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 C11orf24Q96F05 449 aaPredicted RBP10.66□□□□□ -0.7
RTN3-209ENST00000538995 DMRTA2Q96SC8 542 aa10.66□□□□□ -0.7
RTN3-209ENST00000538995 SECISBP2Q96T21 854 aaKnown RBP10.66□□□□□ -0.7
RTN3-209ENST00000538995 OR10A5Q9H207 317 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms